RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PALM2Q8IXS6 379 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 SCYL1Q96KG9 808 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 STIM2Q9P246 746 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 NCAPG2Q86XI2 1143 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 GSPT2Q8IYD1 628 aaKnown RBP17.01■□□□□ 0.31
FNDC1-201ENST00000297267 PPM1KQ8N3J5 372 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 DBNDD1Q9H9R9 158 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 WDR91A4D1P6 747 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 ARHGAP42A6NI28 874 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 FTCDO95954 541 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 TMOD1P28289 359 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 CASP2P42575 452 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 XKR9Q5GH70 373 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 ZNF518AQ6AHZ1 1483 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
FNDC1-201ENST00000297267 SUDS3Q9H7L9 328 aaPredicted RBP17.01■□□□□ 0.31
FNDC1-201ENST00000297267 GBP1P32455 592 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 CPVLQ9H3G5 476 aa17.01■□□□□ 0.31
FNDC1-201ENST00000297267 GUCY2DQ02846 1103 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 ZBTB33Q86T24 672 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 SPTLC3Q9NUV7 552 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 KIAA1024Q9UPX6 916 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 ACTN4O43707 911 aaKnown RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 PDE6AP16499 860 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 YARSP54577 528 aaKnown RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 MESDQ14696 234 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 EFCC1Q9HA90 598 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 RIPOR2Q9Y4F9 1068 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 NOL3O60936 208 aaKnown RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 ZBED4O75132 1171 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 ERFEQ4G0M1 354 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 USH1CQ9Y6N9 552 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 DNMT1P26358 1616 aaKnown RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 MROH5Q6ZUA9 1318 aa17■□□□□ 0.31
FNDC1-201ENST00000297267 GIGYF1O75420 1035 aaPredicted RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.31
FNDC1-201ENST00000297267 SOS2Q07890 1332 aaPredicted RBP17■□□□□ 0.31
FNDC1-201ENST00000297267 KLRF2D3W0D1 207 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 HS1BP3Q53T59 392 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 MSANTD4Q8NCY6 345 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 PNMA1Q8ND90 353 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 DDX12PQ92771 950 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 ZSCAN26Q16670 478 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 USP21Q9UK80 565 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 G3BP2Q9UN86 482 aaKnown RBP16.99■□□□□ 0.31
FNDC1-201ENST00000297267 PIK3CAP42336 1068 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 SLC12A1Q13621 1099 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 ZKSCAN8Q15776 578 aaPredicted RBP16.99■□□□□ 0.31
FNDC1-201ENST00000297267 TMTC1Q8IUR5 882 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 KIAA1524Q8TCG1 905 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
FNDC1-201ENST00000297267 AMFRQ9UKV5 643 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 PCDHA12Q9UN75 941 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 SPDYE16A6NNV3 312 aaPredicted RBP16.99■□□□□ 0.31
FNDC1-201ENST00000297267 CCT5P48643 541 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 TRIM14Q14142 442 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 IMPACTQ9P2X3 320 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 SATB1Q01826 763 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 CCDC14Q49A88 953 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 KRT25Q7Z3Z0 450 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 AP1M1Q9BXS5 423 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 EDC4Q6P2E9 1401 aaKnown RBP16.99■□□□□ 0.31
FNDC1-201ENST00000297267 ATP5JP18859 108 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 PEX19P40855 299 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 FANCBQ8NB91 859 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 GSDMBQ8TAX9 411 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 EPC1Q9H2F5 836 aa16.99■□□□□ 0.31
FNDC1-201ENST00000297267 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
FNDC1-201ENST00000297267 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 RGS16O15492 202 aaPredicted RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 CLTAP09496 248 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 NME8Q8N427 588 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 CNOT6LQ96LI5 555 aaKnown RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 TMEM232C9JQI7 657 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 FAM133BQ5BKY9 247 aaKnown RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 MARK3P27448 753 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 SRGAP2O75044 1071 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 STX2P32856 288 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 SARNPP82979 210 aaKnown RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 LCORLQ8N3X6 602 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 SEPT9Q9UHD8 586 aaPredicted RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 HOXA13P31271 388 aaPredicted RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 LIG4P49917 911 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 MLXIPQ9HAP2 919 aa16.98■□□□□ 0.31
FNDC1-201ENST00000297267 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
FNDC1-201ENST00000297267 CCDC62Q6P9F0 684 aa16.97■□□□□ 0.31
FNDC1-201ENST00000297267 ZNF668Q96K58 619 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms