RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MYO6Q9UM54 1294 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 FAM169AQ9Y6X4 670 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 TGFB2P61812 414 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 STIM1Q13586 685 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 SKIDA1Q1XH10 827 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 CCDC51Q96ER9 411 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 RIOK1Q9BRS2 568 aaKnown RBP11.8□□□□□ -0.52
ERCC3-201ENST00000285398 CRACR2AQ9BSW2 395 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.8□□□□□ -0.52
ERCC3-201ENST00000285398 HPCAL4Q9UM19 191 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 MYH13Q9UKX3 1938 aa11.8□□□□□ -0.52
ERCC3-201ENST00000285398 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 CCT5P48643 541 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 RASSF7Q02833 373 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 CNGA4Q8IV77 575 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 LARGE2Q8N3Y3 721 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 TRIML1Q8N9V2 468 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 NOA1Q8NC60 698 aaKnown RBP11.79□□□□□ -0.52
ERCC3-201ENST00000285398 COG1Q8WTW3 980 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 KAT2BQ92831 832 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 EYA3Q99504 573 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 WDR19Q8NEZ3 1342 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 GSG1L2A8MUP6 293 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 ANTXR2P58335 489 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 MDM2Q00987 491 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-201ENST00000285398 AKAP17AQ02040 695 aaKnown RBP11.79□□□□□ -0.52
ERCC3-201ENST00000285398 CTDSPL2Q05D32 466 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.52
ERCC3-201ENST00000285398 RBL2Q08999 1139 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
ERCC3-201ENST00000285398 SNED1Q8TER0 1413 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 INPP5BP32019 993 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 USP14P54578 494 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 POSTNQ15063 836 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
ERCC3-201ENST00000285398 NT5DC1Q5TFE4 455 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 IFNL3Q8IZI9 196 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
ERCC3-201ENST00000285398 TARSL2A2RTX5 802 aaKnown RBP11.78□□□□□ -0.52
ERCC3-201ENST00000285398 GOLGA6CA6NDK9 693 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 MINDY4BA8MYZ0 360 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 NFKBIEO00221 500 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 GOLGA6DP0CG33 693 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 ERCC5P28715 1186 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-201ENST00000285398 TDO2P48775 406 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 IRAK1P51617 712 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 GBP6Q6ZN66 633 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 TMTC1Q8IUR5 882 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-201ENST00000285398 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 SAMSN1Q9NSI8 373 aaKnown RBP11.78□□□□□ -0.52
ERCC3-201ENST00000285398 GOLGA6AQ9NYA3 693 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 COL4A5P29400 1685 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 MYH7P12883 1935 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 A0A0U1RQJ8 604 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 MFAP3LO75121 409 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 CLSTN1O94985 981 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 PPFIA1Q13136 1202 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 KRT40Q6A162 431 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 RAB11FIP4Q86YS3 637 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 CPLX3Q8WVH0 158 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 ATRIPQ8WXE1 791 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 RPGRIP1Q96KN7 1286 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 RTFDC1Q9BY42 306 aaPredicted RBP11.78□□□□□ -0.52
ERCC3-201ENST00000285398 NAPBQ9H115 298 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 SUFUQ9UMX1 484 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 SCN9AQ15858 1988 aa11.78□□□□□ -0.52
ERCC3-201ENST00000285398 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
ERCC3-201ENST00000285398 ZMYM6O95789 1325 aa11.77□□□□□ -0.52
ERCC3-201ENST00000285398 A6NNZ2 444 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
ERCC3-201ENST00000285398 FOXN1O15353 648 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 GGCXP38435 758 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 PRELPP51888 382 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 AMPD2Q01433 879 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 MORC3Q14149 939 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 TUBB8Q3ZCM7 444 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 TRMT44Q8IYL2 757 aaKnown RBP11.77□□□□□ -0.53
ERCC3-201ENST00000285398 NCOA7Q8NI08 942 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
ERCC3-201ENST00000285398 CD2APQ9Y5K6 639 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 TACC3Q9Y6A5 838 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 KIAA1551Q9HCM1 1747 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 CYP2D6P10635 497 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 SARSP49591 514 aaKnown RBP11.77□□□□□ -0.53
ERCC3-201ENST00000285398 CACNB3P54284 484 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 FBXW10Q5XX13 1052 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.53
ERCC3-201ENST00000285398 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
ERCC3-201ENST00000285398 ECM29Q5VYK3 1845 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms