RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PPP2R3BQ9Y5P8 575 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 WASHC2CQ9Y4E1 1318 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PTPRGP23470 1445 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 KRT37O76014 449 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 SMARCA1P28370 1054 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 GBP1P32455 592 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 HIRAP54198 1017 aaPredicted RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 GSTM4Q03013 218 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 SPEM2Q0P670 501 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 FAPQ12884 760 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 WAPLQ7Z5K2 1190 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 XAGE2Q96GT9 111 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 ZDHHC15Q96MV8 337 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 POLG2Q9UHN1 485 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PCDHA9Q9Y5H5 950 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 MLH3Q9UHC1 1453 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 MGEA5O60502 916 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 MAP3K6O95382 1288 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 ITGA6P23229 1130 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 IARSP41252 1262 aaKnown RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 BTKQ06187 659 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 TRIP4Q15650 581 aaPredicted RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 BTN2A1Q7KYR7 527 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 STRA8Q7Z7C7 330 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 STRN4Q9NRL3 753 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PCDHGB6Q9Y5F9 930 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 ZCCHC11Q5TAX3 1644 aaKnown RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 J3QW42 95 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PRPF3O43395 683 aaKnown RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 LTFP02788 710 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 ICA1Q05084 483 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PCDH1Q08174 1060 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PCSK7Q16549 785 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 FAM26DQ5JW98 314 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 PIK3R6Q5UE93 754 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 CDCA2Q69YH5 1023 aaPredicted RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 PCGF5Q86SE9 256 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 NXPE1Q8N323 547 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 ZDHHC1Q8WTX9 485 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 C14orf119Q9NWQ9 140 aa3.23□□□□□ -1.89
CHD1-201ENST00000284049 NOC2LQ9Y3T9 749 aaKnown RBP3.23□□□□□ -1.89
CHD1-201ENST00000284049 RNASEH2AO75792 299 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 EPHX1P07099 455 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 AMPD2Q01433 879 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 NNTQ13423 1086 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 CCDC38Q502W7 563 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 GPR158Q5T848 1215 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 NBPF12Q5TAG4 269 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 YOD1Q5VVQ6 348 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 CACTIN-AS1Q8N1I8 211 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 TBCBQ99426 244 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 HAUS7Q99871 368 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 TSEN34Q9BSV6 310 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 SARGQ9BW04 601 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 RTFDC1Q9BY42 306 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 ANTXR1Q9H6X2 564 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 RRN3Q9NYV6 651 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 C9orf78Q9NZ63 289 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 LUZP4Q9P127 313 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 TROQ12816 1431 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 MBD5Q9P267 1494 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 NEMP1O14524 444 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 LLGL1Q15334 1064 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 DARS2Q6PI48 645 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 AFAP1L2Q8N4X5 818 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ARL10Q8N8L6 244 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 NUP133Q8WUM0 1156 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 DPF3Q92784 378 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 PLD4Q96BZ4 506 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 CSRNP2Q9H175 543 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 PIDD1Q9HB75 910 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 SAMD15Q9P1V8 674 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 PHF24Q9UPV7 400 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 CORINQ9Y5Q5 1042 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 GPC6Q9Y625 555 aaPredicted RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 TDRD9Q8NDG6 1382 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 FAM170AA1A519 330 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 NPTXRO95502 500 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 PHKG2P15735 406 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 SARSP49591 514 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 CACNB3P54284 484 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 YARSP54577 528 aaKnown RBP3.22□□□□□ -1.89
CHD1-201ENST00000284049 MORC3Q14149 939 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ZNF174Q15697 407 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 FKBP15Q5T1M5 1219 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 USP53Q70EK8 1073 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 OR13H1Q8NG92 308 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 PANK1Q8TE04 598 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 TGFBRAP1Q8WUH2 860 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 UCMAQ8WVF2 138 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 USP26Q9BXU7 913 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ZNF700Q9H0M5 742 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 PLEKHH2Q8IVE3 1493 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 FRMPD1Q5SYB0 1578 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 RICTORQ6R327 1708 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 LOC102724428A0A0B4J2F2 783 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 POTEFA5A3E0 1075 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ANKRD34BA5PLL1 514 aa3.22□□□□□ -1.89
CHD1-201ENST00000284049 ULK1O75385 1050 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms