RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 TXNDC9O14530 226 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 TMEM191BP0C7N4 346 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 SCG2P13521 617 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 VSIG1Q86XK7 387 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 HAUS2Q9NVX0 235 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 LTKP29376 864 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 PDE6CP51160 858 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-201ENST00000275233 MYSM1Q5VVJ2 828 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 DCLK2Q8N568 766 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 CCDC94Q9BW85 323 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-201ENST00000275233 SEC31BQ9NQW1 1179 aa13.06□□□□□ -0.32
SHPRH-201ENST00000275233 RAD17O75943 681 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
SHPRH-201ENST00000275233 MCF2L2Q86YR7 1114 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 CCDC170Q8IYT3 715 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 GJA10Q969M2 543 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PALD1Q9ULE6 856 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 M0R2C6 588 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 GNA14O95837 355 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 SNAP25P60880 206 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 MIGA2Q7L4E1 593 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 TLR7Q9NYK1 1049 aaKnown RBP13.05□□□□□ -0.32
SHPRH-201ENST00000275233 WDR62O43379 1518 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 ADCY8P40145 1251 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PPP1R12CQ9BZL4 782 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 DPH5Q9H2P9 285 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PCDHA1Q9Y5I3 950 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 MAP3K15Q6ZN16 1313 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 BUB1BO60566 1050 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PTPN21Q16825 1174 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 TTBK2Q6IQ55 1244 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 FAM196AQ6ZSG2 479 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 GPR101Q96P66 508 aaPredicted RBP13.05□□□□□ -0.32
SHPRH-201ENST00000275233 USP28Q96RU2 1077 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 SLC4A1P02730 911 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 ARPP19P56211 112 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 NAA35Q5VZE5 725 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
SHPRH-201ENST00000275233 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 PARP2Q9UGN5 583 aa13.05□□□□□ -0.32
SHPRH-201ENST00000275233 OGFRQ9NZT2 677 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 IMPACTQ9P2X3 320 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 PCK1P35558 622 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 PRPF31Q8WWY3 499 aaKnown RBP13.04□□□□□ -0.32
SHPRH-201ENST00000275233 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 PAK2Q13177 524 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 PTGDRQ13258 359 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
SHPRH-201ENST00000275233 KRIT1O00522 736 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 RPN1P04843 607 aaKnown RBP13.04□□□□□ -0.32
SHPRH-201ENST00000275233 PABPC4Q13310 644 aaKnown RBP eCLIP13.04□□□□□ -0.32
SHPRH-201ENST00000275233 RPS6KA2Q15349 733 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 TMOD1P28289 359 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 KRT71Q3SY84 523 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 SH2D4BQ5SQS7 431 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 CCDC84Q86UT8 332 aaPredicted RBP13.04□□□□□ -0.32
SHPRH-201ENST00000275233 STK38LQ9Y2H1 464 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 MED23Q9ULK4 1368 aa13.04□□□□□ -0.32
SHPRH-201ENST00000275233 ADAM9Q13443 819 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 CACYBPQ9HB71 228 aaKnown RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 ARHGAP6O43182 974 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 SARNPP82979 210 aaKnown RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 PHLDB2Q86SQ0 1253 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 LMBRD1Q9NUN5 540 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 MEIS1O00470 390 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 PLCB4Q15147 1175 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 LRCH2Q5VUJ6 765 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 RYBPQ8N488 228 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 ZNF274Q96GC6 653 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 CHAMP1Q96JM3 812 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 NUF2Q9BZD4 464 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 PCDHB4Q9Y5E5 795 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 BZW2Q9Y6E2 419 aaKnown RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 ADCY9O60503 1353 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 NDUFA8P51970 172 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 HADHQ16836 314 aaKnown RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 FAM160B1Q5W0V3 765 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 TLR3O15455 904 aaKnown RBP13.03□□□□□ -0.32
SHPRH-201ENST00000275233 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 FLAD1Q8NFF5 587 aa13.03□□□□□ -0.32
SHPRH-201ENST00000275233 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms