RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 HPSEQ9Y251 543 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 SRPRBQ9Y5M8 271 aaKnown RBP16.61■□□□□ 0.25
TRIM23-202ENST00000274327 NDUFA8P51970 172 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 RESP18Q5W5W9 173 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 KRT25Q7Z3Z0 450 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 ZNF579Q8NAF0 562 aaKnown RBP16.61■□□□□ 0.25
TRIM23-202ENST00000274327 CLIC6Q96NY7 704 aa16.61■□□□□ 0.25
TRIM23-202ENST00000274327 GLIS2Q9BZE0 524 aaPredicted RBP16.61■□□□□ 0.25
TRIM23-202ENST00000274327 SSC5DA1L4H1 1573 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 PLA2G6O60733 806 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 CLCN1P35523 988 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 ADCY7P51828 1080 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 ZNF174Q15697 407 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
TRIM23-202ENST00000274327 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
TRIM23-202ENST00000274327 TNMDQ9H2S6 317 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 GRPEL1Q9HAV7 217 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
TRIM23-202ENST00000274327 PFKFB1P16118 471 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 INPP5BP32019 993 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
TRIM23-202ENST00000274327 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
TRIM23-202ENST00000274327 PHIPQ8WWQ0 1821 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 CLK2P49760 499 aaKnown RBP16.59■□□□□ 0.25
TRIM23-202ENST00000274327 GRIN1Q05586 938 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 CAMK4Q16566 473 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 FAM83BQ5T0W9 1011 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 REXO1Q8N1G1 1221 aaKnown RBP16.59■□□□□ 0.25
TRIM23-202ENST00000274327 PRR12Q9ULL5 1215 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 MRVI1Q9Y6F6 885 aa16.59■□□□□ 0.25
TRIM23-202ENST00000274327 CTAGE5O15320 804 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
TRIM23-202ENST00000274327 STAT2P52630 851 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 NONOQ15233 471 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRIM23-202ENST00000274327 INF2Q27J81 1249 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 PRAMEF18Q5VWM3 479 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 SCYL3Q8IZE3 742 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 FERMT2Q96AC1 680 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 RBSNQ9H1K0 784 aa16.58■□□□□ 0.24
TRIM23-202ENST00000274327 PTGDRQ13258 359 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 GPR162Q16538 588 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 AMNQ9BXJ7 453 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 KIAA1683Q9H0B3 1180 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 GLT8D2Q9H1C3 349 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 TMEM260Q9NX78 707 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 BIN2Q9UBW5 565 aaPredicted RBP16.57■□□□□ 0.24
TRIM23-202ENST00000274327 PAPPA2Q9BXP8 1791 aa16.57■□□□□ 0.24
TRIM23-202ENST00000274327 ZNF202O95125 648 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 IKQ13123 557 aaPredicted RBP16.56■□□□□ 0.24
TRIM23-202ENST00000274327 ZYXQ15942 572 aaKnown RBP16.56■□□□□ 0.24
TRIM23-202ENST00000274327 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 JAKMIP3Q5VZ66 844 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 FAM160B2Q86V87 743 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 CHURC1Q8WUH1 139 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 CUL5Q93034 780 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 KLRG1Q96E93 195 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 TIGD1Q96MW7 591 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 WDR18Q9BV38 432 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 MCM7P33993 719 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
TRIM23-202ENST00000274327 SNAP25P60880 206 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 NOL9Q5SY16 702 aaKnown RBP16.56■□□□□ 0.24
TRIM23-202ENST00000274327 FBXO11Q86XK2 927 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 WRNIP1Q96S55 665 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 FEZ1Q99689 392 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 CSRNP2Q9H175 543 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 RANBP17Q9H2T7 1088 aaKnown RBP16.56■□□□□ 0.24
TRIM23-202ENST00000274327 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 UTRNP46939 3433 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 SCN4AP35499 1836 aa16.56■□□□□ 0.24
TRIM23-202ENST00000274327 WDR46O15213 610 aaKnown RBP16.55■□□□□ 0.24
TRIM23-202ENST00000274327 SYKP43405 635 aa16.55■□□□□ 0.24
TRIM23-202ENST00000274327 ORC2Q13416 577 aaPredicted RBP16.55■□□□□ 0.24
TRIM23-202ENST00000274327 ARL6IP4Q66PJ3 421 aaKnown RBP16.55■□□□□ 0.24
TRIM23-202ENST00000274327 USP50Q70EL3 339 aaPredicted RBP16.55■□□□□ 0.24
TRIM23-202ENST00000274327 NEK8Q86SG6 692 aa16.55■□□□□ 0.24
TRIM23-202ENST00000274327 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
TRIM23-202ENST00000274327 LPAR1Q92633 364 aa16.55■□□□□ 0.24
TRIM23-202ENST00000274327 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
TRIM23-202ENST00000274327 MYH7BA7E2Y1 1941 aa16.55■□□□□ 0.24
TRIM23-202ENST00000274327 SMCHD1A6NHR9 2005 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 PTPRAP18433 802 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 UBE2SQ16763 222 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 TBCKQ8TEA7 893 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 DCPSQ96C86 337 aaKnown RBP16.54■□□□□ 0.24
TRIM23-202ENST00000274327 FAM13BQ9NYF5 915 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 EDIL3O43854 480 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 SPECC1Q5M775 1068 aa16.54■□□□□ 0.24
TRIM23-202ENST00000274327 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms