RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 ABCA9Q8IUA7 1624 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 TBC1D12O60347 775 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 TRPA1O75762 1119 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 SLU7O95391 586 aaKnown RBP9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 ELF2Q15723 593 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 PIP4K2CQ8TBX8 421 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 GALNT8Q9NY28 637 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 SPO11Q9Y5K1 396 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 TSPAN1O60635 241 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 ODF2Q5BJF6 829 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 CWF19L1Q69YN2 538 aaKnown RBP9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 HAUS1Q96CS2 278 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 NAT10Q9H0A0 1025 aaKnown RBP9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 VCXQ9H320 206 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 PRDM15P57071 1507 aaPredicted RBP9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 APOL1O14791 398 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 BPNT1O95861 308 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 PCNAP12004 261 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 ALDH1B1P30837 517 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 SMUG1Q53HV7 270 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 TJAP1Q5JTD0 557 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 C1orf228Q6PIY5 440 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 CATSPER4Q7RTX7 472 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 MIER3Q7Z3K6 550 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 PCMTD1Q96MG8 357 aaPredicted RBP9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 ZNF446Q9NWS9 450 aa9.8□□□□□ -0.84
CTDSPL-201ENST00000273179 CDC27P30260 824 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 ARHGAP25P42331 645 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 ANGPTL8Q6UXH0 198 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 GAS2L3Q86XJ1 694 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 VPS52Q8N1B4 723 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 CSRNP2Q9H175 543 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 ARFGAP3Q9NP61 516 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 C8orf4Q9NR00 106 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 PFDN2Q9UHV9 154 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 ZBTB21Q9ULJ3 1066 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 NOS1P29475 1434 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 LRRIQ3A6PVS8 624 aaPredicted RBP9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 SFI1A8K8P3 1242 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 GUCY1B2O75343 617 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 GRK2P25098 689 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 LRPAP1P30533 357 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 KRT83P78385 493 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 SAFBQ15424 915 aaKnown RBP eCLIP9.79□□□□□ -0.841e-8■□□□□ 8.8
CTDSPL-201ENST00000273179 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 C17orf53Q8N3J3 647 aaPredicted RBP9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 BRSK1Q8TDC3 778 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 SMC6Q96SB8 1091 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 TRIM8Q9BZR9 551 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 GPRASP1Q5JY77 1395 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 PCYT1AP49585 367 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 RCAN1P53805 252 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 RBM6P78332 1123 aaKnown RBP9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 FKBP5Q13451 457 aaPredicted RBP9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 PRKG1Q13976 671 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 IFNL1Q8IU54 200 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 ZNF75CPQ92670 426 aaPredicted RBP9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 TCP11L1Q9NUJ3 509 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 YEATS2Q9ULM3 1422 aa9.79□□□□□ -0.84
CTDSPL-201ENST00000273179 TRIM43BA6NCK2 446 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 MAP3K7O43318 606 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ZBTB16Q05516 673 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 CFAP100Q494V2 611 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 PLCB1Q9NQ66 1216 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ZNF277Q9NRM2 450 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 FKBP14Q9NWM8 211 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 KIDINS220Q9ULH0 1771 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 EIF2AK4Q9P2K8 1649 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 SCAF11Q99590 1463 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 STK25O00506 426 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 CETN3O15182 167 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 EXTL3O43909 919 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 COBLO75128 1261 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 AGR2O95994 175 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 CASTP20810 708 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ALKBH8Q96BT7 664 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 EXOC7Q9UPT5 735 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ZNF518AQ6AHZ1 1483 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 POLR1AO95602 1720 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ENPP1P22413 925 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 SOX11P35716 441 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 CASP2P42575 452 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 TUBA4AP68366 448 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 CORO6Q6QEF8 472 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ST13P4Q8IZP2 240 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 PPHLN1Q8NEY8 458 aaKnown RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 SLC22A8Q8TCC7 542 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 GPT2Q8TD30 523 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 SLC12A5Q9H2X9 1139 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 VRTNQ9H8Y1 702 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 RIC8AQ9NPQ8 531 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 ZNF180Q9UJW8 692 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 PCDHGA3Q9Y5H0 932 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 BHMG1C9JSJ3 638 aaPredicted RBP9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 CHMP4BP1P59074 171 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 MAP3K9P80192 1104 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 STX12Q86Y82 276 aa9.78□□□□□ -0.84
CTDSPL-201ENST00000273179 KIF1BPQ96EK5 621 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms