RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 IKBKGQ9Y6K9 419 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 KDRP35968 1356 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 E9PCH4 1651 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 PDE6AP16499 860 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 ERCC5P28715 1186 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 PFDN1O60925 122 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 PPP6R2O75170 966 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 TCP1P17987 556 aaKnown RBP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 ABCB4P21439 1286 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 RANBP1P43487 201 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 GKAP1Q5VSY0 366 aaPredicted RBP13.34□□□□□ -0.27
ERBB2-201ENST00000269571 CEP128Q6ZU80 1094 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 CABP7Q86V35 215 aa13.34□□□□□ -0.27
ERBB2-201ENST00000269571 PDE8AO60658 829 aa13.33□□□□□ -0.27
ERBB2-201ENST00000269571 HEXIM1O94992 359 aaKnown RBP13.33□□□□□ -0.27
ERBB2-201ENST00000269571 RPN1P04843 607 aaKnown RBP13.33□□□□□ -0.27
ERBB2-201ENST00000269571 SFMBT2Q5VUG0 894 aa13.33□□□□□ -0.27
ERBB2-201ENST00000269571 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.27
ERBB2-201ENST00000269571 RIN2Q8WYP3 895 aaPredicted RBP13.33□□□□□ -0.27
ERBB2-201ENST00000269571 TUBGCP2Q9BSJ2 902 aa13.33□□□□□ -0.27
ERBB2-201ENST00000269571 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.27
ERBB2-201ENST00000269571 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.27
ERBB2-201ENST00000269571 ALKQ9UM73 1620 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 H7C1D1 291 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 NDUFA10O95299 355 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
ERBB2-201ENST00000269571 PLA2G4AP47712 749 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 VSNL1P62760 191 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 NNTQ13423 1086 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 LLGL1Q15334 1064 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 EPHA10Q5JZY3 1008 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 TSC22D3Q99576 134 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 PLVAPQ9BX97 442 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 PUS7LQ9H0K6 701 aaKnown RBP13.33□□□□□ -0.28
ERBB2-201ENST00000269571 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 PSD3Q9NYI0 1048 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 SPOPO43791 374 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 PDE6BP35913 854 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 GGCXP38435 758 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 TCIRG1Q13488 830 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 INF2Q27J81 1249 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 TRAPPC3LQ5T215 181 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 NAIF1Q69YI7 327 aaPredicted RBP13.33□□□□□ -0.28
ERBB2-201ENST00000269571 ZNF365Q70YC5 407 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 RASGRP4Q8TDF6 673 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.28
ERBB2-201ENST00000269571 NYXQ9GZU5 481 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 USP21Q9UK80 565 aa13.33□□□□□ -0.28
ERBB2-201ENST00000269571 SNX29Q8TEQ0 813 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 ZBTB21Q9ULJ3 1066 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 GLI2P10070 1586 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 GBP1P32455 592 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 LPIN2Q92539 896 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 TNKSO95271 1327 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 KRIT1O00522 736 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 CETN3O15182 167 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 ACTN4O43707 911 aaKnown RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 HIP1RO75146 1068 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 MOCS3O95396 460 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 KCNQ4P56696 695 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 PTPN12Q05209 780 aaKnown RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 SEPT6Q14141 434 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 TTLL12Q14166 644 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 IQCGQ9H095 443 aaKnown RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 CEP152O94986 1710 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 TULP2O00295 520 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 HNRNPH1P31943 449 aaKnown RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 HS2ST1Q7LGA3 356 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 SPATA24Q86W54 205 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 SPATA5Q8NB90 893 aa13.32□□□□□ -0.28
ERBB2-201ENST00000269571 ARHGEF2Q92974 986 aaKnown RBP13.32□□□□□ -0.28
ERBB2-201ENST00000269571 ENO4A6NNW6 628 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 FTCDO95954 541 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 VPS41P49754 854 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 GBP5Q96PP8 586 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 GSDMAQ96QA5 445 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 DENND2AQ9ULE3 1009 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 PRPHP41219 470 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 POLR2FP61218 127 aaKnown RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 SP4Q02446 784 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 TCHPQ9BT92 498 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 STIM2Q9P246 746 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 ASIC3Q9UHC3 531 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 USP17L12C9JPN9 530 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 USP17L21D6R901 530 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 MFAP3LO75121 409 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 GCFC2P16383 781 aaKnown RBP13.31□□□□□ -0.28
ERBB2-201ENST00000269571 TNFAIP3P21580 790 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 CCDC65Q8IXS2 484 aa13.31□□□□□ -0.28
ERBB2-201ENST00000269571 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms