RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 MORC3Q14149 939 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 RBBP5Q15291 538 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 C1QTNF12Q5T7M4 302 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 PAPD7Q5XG87 772 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 GPIHBP1Q8IV16 184 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 HELBQ8NG08 1087 aaPredicted RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 MAGEC3Q8TD91 643 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 CCDC43Q96MW1 224 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 POLR2DO15514 142 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 RXRAP19793 462 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 FECHP22830 423 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 TFCP2Q12800 502 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 CCDC102BQ68D86 513 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 HIBCHQ6NVY1 386 aaPredicted RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 SPICE1Q8N0Z3 855 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 PLBD2Q8NHP8 589 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 RSRC1Q96IZ7 334 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 NAA15Q9BXJ9 866 aaKnown RBP9.77□□□□□ -0.85
VAPB-201ENST00000265619 VPS16Q9H269 839 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 PANK4Q9NVE7 773 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 C15orf41Q9Y2V0 281 aa9.77□□□□□ -0.85
VAPB-201ENST00000265619 HIP1O00291 1037 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 TIMM10P62072 90 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 POSTNQ15063 836 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 GNPTABQ3T906 1256 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 MICALCLQ6ZW33 695 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 AGAP11Q8TF27 550 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 TCP11Q8WWU5 503 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 PRCCQ92733 491 aaPredicted RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 BIN2Q9UBW5 565 aaPredicted RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 DENND2AQ9ULE3 1009 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 A8MUI8 341 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 NPM3O75607 178 aaKnown RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 NDUFA10O95299 355 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 ECEL1O95672 775 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 XRCC4Q13426 336 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 KCTD17Q8N5Z5 321 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 DRAXINQ8NBI3 349 aaPredicted RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 OR2W6PQ8NHA6 318 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 CUL5Q93034 780 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 SPAG5Q96R06 1193 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 ANKRD18BA2A2Z9 1011 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 SPDYE3A6NKU9 549 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 DIAPH2O60879 1101 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 CARSP49589 748 aaKnown RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 SARSP49591 514 aaKnown RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 GUCY2FP51841 1108 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 HSP90AB4PQ58FF6 505 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 SPATS2Q86XZ4 545 aaKnown RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 CREG2Q8IUH2 290 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 PUS3Q9BZE2 481 aaKnown RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 EPN1Q9Y6I3 576 aaPredicted RBP9.76□□□□□ -0.85
VAPB-201ENST00000265619 PXDNLA1KZ92 1463 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 SPATA31A1Q5TZJ5 1347 aa9.76□□□□□ -0.85
VAPB-201ENST00000265619 TTC36A6NLP5 189 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 OPA1O60313 960 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 HAND2P61296 217 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 ITGB3BPQ13352 177 aaPredicted RBP9.75□□□□□ -0.85
VAPB-201ENST00000265619 HAUS3Q68CZ6 603 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 HOOK2Q96ED9 719 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 SEC16BQ96JE7 1060 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 NUP88Q99567 741 aaPredicted RBP9.75□□□□□ -0.85
VAPB-201ENST00000265619 JADE2Q9NQC1 790 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 CNOT8Q9UFF9 292 aaKnown RBP9.75□□□□□ -0.85
VAPB-201ENST00000265619 MACROD2A1Z1Q3 448 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 HSF2BPO75031 334 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 CLTAP09496 248 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 KRT9P35527 623 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 CCDC57Q2TAC2 916 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 LRRC24Q50LG9 513 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 IQCKQ8N0W5 287 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 HVCN1Q96D96 273 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 EPAS1Q99814 870 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 NFU1Q9UMS0 254 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
VAPB-201ENST00000265619 SPDYE5A6NIY4 337 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 CYP27A1Q02318 531 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 PPP1R7Q15435 360 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 WDR59Q6PJI9 974 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 TMTC1Q8IUR5 882 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 TAB2Q9NYJ8 693 aa9.75□□□□□ -0.85
VAPB-201ENST00000265619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.75□□□□□ -0.851e-8■■■□□ 16.6
VAPB-201ENST00000265619 DBNLQ9UJU6 430 aaKnown RBP9.75□□□□□ -0.85
VAPB-201ENST00000265619 U3KPZ7 1027 aaPredicted RBP9.75□□□□□ -0.85
VAPB-201ENST00000265619 MYH7P12883 1935 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 A0A087X0B3 334 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 LOC102724428A0A0B4J2F2 783 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 SNAP23O00161 211 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 ZPR1O75312 459 aa9.74□□□□□ -0.85
VAPB-201ENST00000265619 RTN3O95197 1032 aaPredicted RBP9.74□□□□□ -0.85
VAPB-201ENST00000265619 GLI1P08151 1106 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms