RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ZBTB33Q86T24 672 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 TTC41PQ6P2S7 1318 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 GPBP1Q86WP2 473 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 SMC5Q8IY18 1101 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 NRBF2Q96F24 287 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 SYTL2Q9HCH5 934 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 SLC8A2Q9UPR5 921 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 TMEM247A6NEH6 219 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 GNA14O95837 355 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 MTX1Q13505 466 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 FLOT2Q14254 428 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 AKT3Q9Y243 479 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 GLE1Q53GS7 698 aaKnown RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 BUB1O43683 1085 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 TMEM191BP0C7N4 346 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 TMOD1P28289 359 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 ZNF467Q7Z7K2 595 aaPredicted RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 TGFBRAP1Q8WUH2 860 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 LUC7L3O95232 432 aaKnown RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 WDR48Q8TAF3 677 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 HOMER3Q9NSC5 361 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 UHMK1Q8TAS1 419 aaKnown RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 SLC7A5P2Q9GIP4 190 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 LRRIQ4A6NIV6 560 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 hCG_1642624A0A1W2PR95 340 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 PMLP29590 882 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 ZC3H12BQ5HYM0 836 aaKnown RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 MIS12Q9H081 205 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 IGHDP01880 384 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 CEBPAP49715 358 aaPredicted RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 KRT25Q7Z3Z0 450 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 ACEP12821 1306 aa12.42□□□□□ -0.42
PTPN4-201ENST00000263708 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
PTPN4-201ENST00000263708 MAP3K7O43318 606 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 PHKBQ93100 1093 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 TRAIPQ9BWF2 469 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 SLC12A6Q9UHW9 1150 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 PRDM1O75626 825 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ACTN1P12814 892 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 TMTC1Q8IUR5 882 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ESRRBO95718 433 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 XKR9Q5GH70 373 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 DPH5Q9H2P9 285 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 TRAPPC10P48553 1259 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 METTL23Q86XA0 190 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 DNAAF3Q8N9W5 541 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 SNX19Q92543 992 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
PTPN4-201ENST00000263708 COG4Q9H9E3 785 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ART3Q13508 389 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ATL3Q6DD88 541 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 AS3MTQ9HBK9 375 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ITGA6P23229 1130 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 DAB2P98082 770 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 HSP90AA5PQ58FG0 334 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 SCYL3Q8IZE3 742 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 NCOA5Q9HCD5 579 aaKnown RBP12.41□□□□□ -0.42
PTPN4-201ENST00000263708 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ZNF148Q9UQR1 794 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 HSPA8P11142 646 aaKnown RBP12.41□□□□□ -0.42
PTPN4-201ENST00000263708 PCDHB4Q9Y5E5 795 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 THOC5Q13769 683 aaKnown RBP12.41□□□□□ -0.42
PTPN4-201ENST00000263708 CCNYQ8ND76 341 aa12.41□□□□□ -0.42
PTPN4-201ENST00000263708 LARSQ9P2J5 1176 aaKnown RBP12.41□□□□□ -0.42
PTPN4-201ENST00000263708 ABCC5O15440 1437 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 TRIM55Q9BYV6 548 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 KCNG1Q9UIX4 513 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 CPP00450 1065 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 KRT80Q6KB66 452 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
PTPN4-201ENST00000263708 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 SNX25Q9H3E2 840 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 ALDH1L1O75891 902 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 ZNF202O95125 648 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 GNGT1P63211 74 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 CAPRIN1Q14444 709 aaKnown RBP12.4□□□□□ -0.42
PTPN4-201ENST00000263708 TTC19Q6DKK2 380 aaPredicted RBP12.4□□□□□ -0.42
PTPN4-201ENST00000263708 IWS1Q96ST2 819 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 CCDC85BQ15834 202 aaPredicted RBP12.4□□□□□ -0.42
PTPN4-201ENST00000263708 HS1BP3Q53T59 392 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 MAPKAPK5Q8IW41 473 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 CFAP36Q96G28 342 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 ABHD8Q96I13 439 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 CUTAO60888 179 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 FBLN1P23142 703 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 TEX12Q9BXU0 123 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 INPP5FQ9Y2H2 1132 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 ATP8B2P98198 1209 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 EXT2Q93063 718 aa12.4□□□□□ -0.42
PTPN4-201ENST00000263708 ALAS1P13196 640 aa12.4□□□□□ -0.43
PTPN4-201ENST00000263708 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.43
PTPN4-201ENST00000263708 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms