RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TRIM75PA6NK02 468 aa26.21■■□□□ 1.79
SMARCB1-201ENST00000263121 CHURC1Q8WUH1 139 aa26.21■■□□□ 1.79
SMARCB1-201ENST00000263121 AS3MTQ9HBK9 375 aa26.21■■□□□ 1.79
SMARCB1-201ENST00000263121 A0A1W2PQ27 194 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 A0A1W2PQ64 194 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 A0A1W2PQD8 194 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 ZSCAN23Q3MJ62 389 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 AXDND1Q5T1B0 1012 aaPredicted RBP26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 FAM160B2Q86V87 743 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 JMYQ8N9B5 988 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 FEM1BQ9UK73 627 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 CEP131Q9UPN4 1083 aa26.2■■□□□ 1.78
SMARCB1-201ENST00000263121 CCDC194A0A1B0GVG4 234 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 WNT7AO00755 349 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 WDR46O15213 610 aaKnown RBP26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 ADCY7P51828 1080 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 RIC8AQ9NPQ8 531 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 ATP2B1P20020 1258 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 MARCKSP29966 332 aaPredicted RBP26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 MTMR2Q13614 643 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 TTC38Q5R3I4 469 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 KRT25Q7Z3Z0 450 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 PNMA8AQ86V59 439 aaPredicted RBP26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 ZNF280CQ8ND82 737 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 AMNQ9BXJ7 453 aa26.19■■□□□ 1.78
SMARCB1-201ENST00000263121 OTOFQ9HC10 1997 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 USP14P54578 494 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 SNAP25P60880 206 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 SPP2Q13103 211 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 CCDC183Q5T5S1 534 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 CCAR1Q8IX12 1150 aaKnown RBP26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 REXO1Q8N1G1 1221 aaKnown RBP26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 CDCA5Q96FF9 252 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 PCDHA1Q9Y5I3 950 aa26.18■■□□□ 1.78
SMARCB1-201ENST00000263121 BMP15O95972 392 aa26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 BACE1P56817 501 aa26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 PRKG1Q13976 671 aa26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 EAPPQ56P03 285 aaPredicted RBP26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 FBXO11Q86XK2 927 aa26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 RANBP17Q9H2T7 1088 aaKnown RBP26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 GOLPH3LQ9H4A5 285 aa26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 EMILIN3Q9NT22 766 aa26.17■■□□□ 1.78
SMARCB1-201ENST00000263121 PPP1R12BO60237 982 aaPredicted RBP26.16■■□□□ 1.78
SMARCB1-201ENST00000263121 MAP3K9P80192 1104 aa26.16■■□□□ 1.78
SMARCB1-201ENST00000263121 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.16■■□□□ 1.78
SMARCB1-201ENST00000263121 ZHX2Q9Y6X8 837 aa26.16■■□□□ 1.78
SMARCB1-201ENST00000263121 CLK2P49760 499 aaKnown RBP26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 ZNF445P59923 1031 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 FSIP1Q8NA03 581 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 MRPS27Q92552 414 aaKnown RBP26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 CUL5Q93034 780 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 FBXO28Q9NVF7 368 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 SNCAIPQ9Y6H5 919 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 CUTAO60888 179 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 NR1I2O75469 434 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 VCAM1P19320 739 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 DGKZQ13574 1117 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 VGLL4Q14135 290 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 NONOQ15233 471 aaKnown RBP eCLIP26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 KRI1Q8N9T8 703 aaKnown RBP26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 KIFC2Q96AC6 838 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 C12orf42Q96LP6 360 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 GLT8D2Q9H1C3 349 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 DACT1Q9NYF0 836 aa26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 BIN2Q9UBW5 565 aaPredicted RBP26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 FBXO2Q9UK22 296 aaPredicted RBP26.15■■□□□ 1.78
SMARCB1-201ENST00000263121 PTPREP23469 700 aa26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 MRPL12P52815 198 aaKnown RBP26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 ZNF174Q15697 407 aa26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 INF2Q27J81 1249 aa26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 ENGASEQ8NFI3 743 aa26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 PSTPIP2Q9H939 334 aa26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 DDX19AQ9NUU7 478 aaKnown RBP26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 TMEM260Q9NX78 707 aa26.14■■□□□ 1.78
SMARCB1-201ENST00000263121 CMA1P23946 247 aa26.13■■□□□ 1.77
SMARCB1-201ENST00000263121 NF2P35240 595 aa26.13■■□□□ 1.77
SMARCB1-201ENST00000263121 JAKMIP3Q5VZ66 844 aa26.13■■□□□ 1.77
SMARCB1-201ENST00000263121 CCDC73Q6ZRK6 1079 aa26.13■■□□□ 1.77
SMARCB1-201ENST00000263121 C19orf81C9J6K1 198 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 IREB2P48200 963 aaKnown RBP26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 ATP2C1P98194 919 aaPredicted RBP26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 FAM160A1Q05DH4 1040 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 TRAF1Q13077 416 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 SNW1Q13573 536 aaKnown RBP26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 AFG3L2Q9Y4W6 797 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 SRPRBQ9Y5M8 271 aaKnown RBP26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 SHC4Q6S5L8 630 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 CLIC6Q96NY7 704 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 SLF1Q9BQI6 1058 aa26.12■■□□□ 1.77
SMARCB1-201ENST00000263121 MAP3K11Q16584 847 aa26.11■■□□□ 1.77
SMARCB1-201ENST00000263121 UBE2SQ16763 222 aa26.11■■□□□ 1.77
SMARCB1-201ENST00000263121 USH1GQ495M9 461 aa26.11■■□□□ 1.77
SMARCB1-201ENST00000263121 PRPF38AQ8NAV1 312 aaKnown RBP26.11■■□□□ 1.77
SMARCB1-201ENST00000263121 CSADQ9Y600 493 aa26.11■■□□□ 1.77
SMARCB1-201ENST00000263121 MRVI1Q9Y6F6 885 aa26.11■■□□□ 1.77
SMARCB1-201ENST00000263121 FAM237AA0A1B0GTK4 181 aa26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 SYCE3A1L190 88 aa26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 MCM7P33993 719 aa26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 PTGDRQ13258 359 aa26.1■■□□□ 1.77
SMARCB1-201ENST00000263121 RESP18Q5W5W9 173 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms