RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ADAMTS3O15072 1205 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 PTPRAP18433 802 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 USP14P54578 494 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 NOM1Q5C9Z4 860 aaKnown RBP14.89□□□□□ -0.03
VAMP7-201ENST00000262640 CCDC183Q5T5S1 534 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 GLT8D2Q9H1C3 349 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 RIC8AQ9NPQ8 531 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 PRR12Q9ULL5 1215 aa14.89□□□□□ -0.03
VAMP7-201ENST00000262640 WDR46O15213 610 aaKnown RBP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 LIG1P18858 919 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 ATP2B1P20020 1258 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 TRAF1Q13077 416 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 TTC38Q5R3I4 469 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 PNMA8AQ86V59 439 aaPredicted RBP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 CCAR1Q8IX12 1150 aaKnown RBP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 REXO1Q8N1G1 1221 aaKnown RBP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 RASGRP4Q8TDF6 673 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 AMNQ9BXJ7 453 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 USP2O75604 605 aaPredicted RBP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 MARCKSP29966 332 aaPredicted RBP14.88□□□□□ -0.03
VAMP7-201ENST00000262640 PCDHA1Q9Y5I3 950 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 WDR90Q96KV7 1748 aa14.88□□□□□ -0.03
VAMP7-201ENST00000262640 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 AXDND1Q5T1B0 1012 aaPredicted RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 CCDC73Q6ZRK6 1079 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 FBXO11Q86XK2 927 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 ZNF280CQ8ND82 737 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 MRPS27Q92552 414 aaKnown RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 CUL5Q93034 780 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 FZD1Q9UP38 647 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 CUTAO60888 179 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 NF2P35240 595 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 MRPL12P52815 198 aaKnown RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 MTMR2Q13614 643 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 EAPPQ56P03 285 aaPredicted RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 KRI1Q8N9T8 703 aaKnown RBP14.87□□□□□ -0.03
VAMP7-201ENST00000262640 FSIP1Q8NA03 581 aa14.87□□□□□ -0.03
VAMP7-201ENST00000262640 POTECB2RU33 542 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 BACE1P56817 501 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 ZNF445P59923 1031 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 MAP3K9P80192 1104 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 SPP2Q13103 211 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 NONOQ15233 471 aaKnown RBP eCLIP14.86□□□□□ -0.03
VAMP7-201ENST00000262640 POLR2AP24928 1970 aaKnown RBP14.86□□□□□ -0.03
VAMP7-201ENST00000262640 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
VAMP7-201ENST00000262640 CMA1P23946 247 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 CDCA5Q96FF9 252 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 RANBP17Q9H2T7 1088 aaKnown RBP14.86□□□□□ -0.03
VAMP7-201ENST00000262640 PSTPIP2Q9H939 334 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 DACT1Q9NYF0 836 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
VAMP7-201ENST00000262640 PTPREP23469 700 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 IREB2P48200 963 aaKnown RBP14.85□□□□□ -0.03
VAMP7-201ENST00000262640 SNAP25P60880 206 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 FAM160A1Q05DH4 1040 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 PRKG1Q13976 671 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 KIFC2Q96AC6 838 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 GOLPH3LQ9H4A5 285 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 EMILIN3Q9NT22 766 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 BIN2Q9UBW5 565 aaPredicted RBP14.85□□□□□ -0.03
VAMP7-201ENST00000262640 C19orf81C9J6K1 198 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 NR1I2O75469 434 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 ZNF174Q15697 407 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 INF2Q27J81 1249 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 DLK2Q6UY11 383 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 TEX2Q8IWB9 1127 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 C12orf42Q96LP6 360 aa14.85□□□□□ -0.03
VAMP7-201ENST00000262640 FBXO2Q9UK22 296 aaPredicted RBP14.85□□□□□ -0.03
VAMP7-201ENST00000262640 WNT7AO00755 349 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 VCAM1P19320 739 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 JAKMIP3Q5VZ66 844 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.84□□□□□ -0.03
VAMP7-201ENST00000262640 SLF1Q9BQI6 1058 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 NUP62CLQ9H1M0 184 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 SRPRBQ9Y5M8 271 aaKnown RBP14.84□□□□□ -0.03
VAMP7-201ENST00000262640 CSADQ9Y600 493 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 SNCAIPQ9Y6H5 919 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 CLK2P49760 499 aaKnown RBP14.84□□□□□ -0.03
VAMP7-201ENST00000262640 ATP2C1P98194 919 aaPredicted RBP14.84□□□□□ -0.03
VAMP7-201ENST00000262640 VGLL4Q14135 290 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 MCTP2Q6DN12 878 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 ZNF579Q8NAF0 562 aaKnown RBP14.84□□□□□ -0.03
VAMP7-201ENST00000262640 PRPF38AQ8NAV1 312 aaKnown RBP14.84□□□□□ -0.03
VAMP7-201ENST00000262640 ENGASEQ8NFI3 743 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 FERMT2Q96AC1 680 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 TMEM260Q9NX78 707 aa14.84□□□□□ -0.03
VAMP7-201ENST00000262640 SYCE3A1L190 88 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 MCM7P33993 719 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 ORC2Q13416 577 aaPredicted RBP14.83□□□□□ -0.04
VAMP7-201ENST00000262640 USH1GQ495M9 461 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 RESP18Q5W5W9 173 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 NEK8Q86SG6 692 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 TANGO6Q9C0B7 1094 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 CLSTN2Q9H4D0 955 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 AFG3L2Q9Y4W6 797 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 PTGDRQ13258 359 aa14.83□□□□□ -0.04
VAMP7-201ENST00000262640 SNW1Q13573 536 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms