RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 GPR25O00155 361 aa19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 CDC37Q16543 378 aaPredicted RBP19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 CPXCR1Q8N123 301 aa19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 GTF3C6Q969F1 213 aa19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 SPATC1LQ9H0A9 340 aa19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 RAVER2Q9HCJ3 691 aaKnown RBP19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 SH2B1Q9NRF2 756 aaPredicted RBP19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 A0A0G2JMZ2 1700 aa19.29■□□□□ 0.68
CHCHD3-201ENST00000262570 ZBTB5O15062 677 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 IFNAR1P17181 557 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 STAT3P40763 770 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 CCDC174Q6PII3 467 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 NECAB1Q8N987 351 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 PIGSQ96S52 555 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 TEX13BQ9BXU2 312 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 TSKSQ9UJT2 592 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 CNTNAP5Q8WYK1 1306 aa19.28■□□□□ 0.68
CHCHD3-201ENST00000262570 CPLX1O14810 134 aa19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 ICAM1P05362 532 aa19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 PLS1Q14651 629 aa19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 QRICH1Q2TAL8 776 aa19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 AGBL1Q96MI9 1066 aa19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 MOV10L1Q9BXT6 1211 aaKnown RBP19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 BAZ2BQ9UIF8 2168 aaKnown RBP19.27■□□□□ 0.68
CHCHD3-201ENST00000262570 PNMA6FA0A0J9YX94 578 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 HSPA1AP0DMV8 641 aaKnown RBP19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 HSPA1BP0DMV9 641 aaKnown RBP19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 CCNA1P78396 465 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 SP3Q02447 781 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 ST3GAL1Q11201 340 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 HOMER1Q86YM7 354 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 RIOX2Q8IUF8 465 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 RRP36Q96EU6 259 aaKnown RBP19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 TMX3Q96JJ7 454 aa19.27■□□□□ 0.67
CHCHD3-201ENST00000262570 CPLX2Q6PUV4 134 aaKnown RBP19.26■□□□□ 0.67
CHCHD3-201ENST00000262570 SNX21Q969T3 373 aa19.26■□□□□ 0.67
CHCHD3-201ENST00000262570 PORCNQ9H237 461 aa19.26■□□□□ 0.67
CHCHD3-201ENST00000262570 PNMA2Q9UL42 364 aa19.26■□□□□ 0.67
CHCHD3-201ENST00000262570 RIPK3Q9Y572 518 aa19.26■□□□□ 0.67
CHCHD3-201ENST00000262570 V9GY48 417 aaPredicted RBP19.26■□□□□ 0.67
CHCHD3-201ENST00000262570 FOXN1O15353 648 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 PPP1R11O60927 126 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 CTDNEP1O95476 244 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 SLC25A27O95847 323 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 LACTBP83111 547 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 SHCBP1Q8NEM2 672 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 ZNF296Q8WUU4 475 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 PHKBQ93100 1093 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 RNF26Q9BY78 433 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 CCPG1Q9ULG6 757 aa19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 COL11A1P12107 1806 aaPredicted RBP19.25■□□□□ 0.67
CHCHD3-201ENST00000262570 hCG_1642624A0A1W2PR95 340 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 CDKL5O76039 1030 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 ERCC3P19447 782 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 FBXO11Q86XK2 927 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 CCDC83Q8IWF9 413 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 AMNQ9BXJ7 453 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 EFCC1Q9HA90 598 aa19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 SEC63Q9UGP8 760 aaKnown RBP19.24■□□□□ 0.67
CHCHD3-201ENST00000262570 FKTNO75072 461 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 PPFIA3O75145 1194 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 COPB2P35606 906 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 SLC26A6Q9BXS9 759 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 MROH8Q9H579 483 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 RBM27Q9P2N5 1060 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 FMNL1O95466 1100 aaPredicted RBP19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 ALAS1P13196 640 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 TAL1P17542 331 aaPredicted RBP19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 CTGFP29279 349 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 MAPK4P31152 587 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 SLC4A3P48751 1232 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 SSRP1Q08945 709 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 TKFCQ3LXA3 575 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 USH1GQ495M9 461 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 NCAPG2Q86XI2 1143 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 NSUN7Q8NE18 718 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 PCDHA1Q9Y5I3 950 aa19.23■□□□□ 0.67
CHCHD3-201ENST00000262570 AKAP17AQ02040 695 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 TRAF1Q13077 416 aa19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 PKN1Q16512 942 aa19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 TRIM22Q8IYM9 498 aa19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 CHST13Q8NET6 341 aa19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 TRERF1Q96PN7 1200 aa19.22■□□□□ 0.67
CHCHD3-201ENST00000262570 PSMC4P43686 418 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 CTCFP49711 727 aaPredicted RBP19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 CAP1Q01518 475 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 KIF22Q14807 665 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 GPR142Q7Z601 462 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 LLPHQ9BRT6 129 aaKnown RBP19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 ARHGAP39Q9C0H5 1083 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 HOMER2Q9NSB8 354 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 RNF146Q9NTX7 359 aa19.21■□□□□ 0.67
CHCHD3-201ENST00000262570 FBXO40Q9UH90 709 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms