RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CCDC148Q8NFR7 591 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 C6orf50Q9HD87 102 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 MORC2Q9Y6X9 1032 aaPredicted RBP16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 ARAP2Q8WZ64 1704 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 PDHBP11177 359 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 SEPT2Q15019 361 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 ARMCX5Q6P1M9 558 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 VPS16Q9H269 839 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 BARHL2Q9NY43 387 aa16.53■□□□□ 0.24
TRAFD1-201ENST00000257604 PALM3A6NDB9 673 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 RGL2O15211 777 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 ATP2C1P98194 919 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 CCDC178Q5BJE1 867 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 FERMT2Q96AC1 680 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 PCNTO95613 3336 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L15C9J2P7 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L13C9JLJ4 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L11C9JVI0 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L18D6R9N7 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L22D6RA61 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L17D6RBQ6 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L19D6RCP7 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L20D6RJB6 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L24Q0WX57 530 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 TERF2Q15554 542 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 USP17L6PQ6QN14 398 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 REXO1Q8N1G1 1221 aaKnown RBP16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 TNFRSF25Q93038 417 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 OSBPL5Q9H0X9 879 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 STK32BQ9NY57 414 aa16.52■□□□□ 0.24
TRAFD1-201ENST00000257604 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
TRAFD1-201ENST00000257604 SLC1A4P43007 532 aa16.52■□□□□ 0.23
TRAFD1-201ENST00000257604 SYCP1Q15431 976 aa16.52■□□□□ 0.23
TRAFD1-201ENST00000257604 DYMQ7RTS9 669 aa16.52■□□□□ 0.23
TRAFD1-201ENST00000257604 MYH6P13533 1939 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 TRIM49BA6NDI0 452 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 TDP2O95551 362 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 CDC25BP30305 580 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 CERKLQ49MI3 558 aaPredicted RBP16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 POTEAQ6S8J7 498 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 SARM1Q6SZW1 724 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 HSD3B7Q9H2F3 369 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 ZSWIM4Q9H7M6 989 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 ZNF446Q9NWS9 450 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 ATF5Q9Y2D1 282 aaPredicted RBP16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 TEX33O43247 280 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 SEC31AO94979 1220 aaKnown RBP16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 SLU7O95391 586 aaKnown RBP16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 IDEP14735 1019 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 NONOQ15233 471 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 RREB1Q92766 1687 aa16.51■□□□□ 0.23
TRAFD1-201ENST00000257604 TTLL1O95922 423 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 ADGRF4Q8IZF3 695 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 ZHX3Q9H4I2 956 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 DNAI1Q9UI46 699 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 POTEMA6NI47 508 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 EEF2P13639 858 aaKnown RBP16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 E4F1Q66K89 784 aaPredicted RBP16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 TCP11L1Q9NUJ3 509 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 THSD7AQ9UPZ6 1657 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 NRDCO43847 1150 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 SHMT1P34896 483 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 GABPB1Q06547 395 aaPredicted RBP16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 KANK3Q6NY19 840 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 MED15Q96RN5 788 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 DESI2Q9BSY9 194 aa16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 ZCCHC17Q9NP64 241 aaKnown RBP16.5■□□□□ 0.23
TRAFD1-201ENST00000257604 PLSCR1O15162 318 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 NEMFO60524 1076 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 DPYDQ12882 1025 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 CSRNP1Q96S65 589 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 MTRQ99707 1265 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 SYNRGQ9UMZ2 1314 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 GNA11P29992 359 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 GYS2P54840 703 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 CDK5RAP3Q96JB5 506 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 TAB2Q9NYJ8 693 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 GAKO14976 1311 aa16.49■□□□□ 0.23
TRAFD1-201ENST00000257604 MORC3Q14149 939 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 CDAN1Q8IWY9 1227 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 MLKLQ8NB16 471 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 DACH1Q9UI36 760 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 TAF1LQ8IZX4 1826 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 GH2P01242 217 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 ASIC1P78348 528 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 C15orf52Q6ZUT6 534 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 PODNQ7Z5L7 613 aa16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
TRAFD1-201ENST00000257604 URI1O94763 535 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms