RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 RIPOR2Q9Y4F9 1068 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 SYNRGQ9UMZ2 1314 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 PSME4Q14997 1843 aa13.22□□□□□ -0.29
CCNA1-201ENST00000255465 A6NHS1 94 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 WDHD1O75717 1129 aaPredicted RBP13.21□□□□□ -0.29
CCNA1-201ENST00000255465 GNG11P61952 73 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 RPAP2Q8IXW5 612 aaPredicted RBP13.21□□□□□ -0.29
CCNA1-201ENST00000255465 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.29
CCNA1-201ENST00000255465 RUBCNQ92622 972 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 TSC22D3Q99576 134 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 EPC1Q9H2F5 836 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 MMADHCQ9H3L0 296 aaPredicted RBP13.21□□□□□ -0.29
CCNA1-201ENST00000255465 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 PPP2R2CQ9Y2T4 447 aa13.21□□□□□ -0.29
CCNA1-201ENST00000255465 ENO4A6NNW6 628 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 SNAP23O00161 211 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 BIN1O00499 593 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 RNF8O76064 485 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.3
CCNA1-201ENST00000255465 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.3
CCNA1-201ENST00000255465 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 EMC10Q5UCC4 262 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 FUKQ8N0W3 1084 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 TTC14Q96N46 770 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.3
CCNA1-201ENST00000255465 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 ZNRF3Q9ULT6 936 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.21□□□□□ -0.3
CCNA1-201ENST00000255465 GMEB1Q9Y692 573 aa13.21□□□□□ -0.3
CCNA1-201ENST00000255465 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 WDR90Q96KV7 1748 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 TARSL2A2RTX5 802 aaKnown RBP13.2□□□□□ -0.3
CCNA1-201ENST00000255465 NDUFAB1O14561 156 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 FANCGO15287 622 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 DDNO94850 711 aaPredicted RBP13.2□□□□□ -0.3
CCNA1-201ENST00000255465 EIF6P56537 245 aaKnown RBP13.2□□□□□ -0.3
CCNA1-201ENST00000255465 STIM1Q13586 685 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 BLMHQ13867 455 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 ITGB1BP2Q9UKP3 347 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 PA2G4Q9UQ80 394 aaKnown RBP13.2□□□□□ -0.3
CCNA1-201ENST00000255465 WDR37Q9Y2I8 494 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
CCNA1-201ENST00000255465 SCN4AP35499 1836 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 LRRIQ3A6PVS8 624 aaPredicted RBP13.19□□□□□ -0.3
CCNA1-201ENST00000255465 B4DLN1 442 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 EYA2O00167 538 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 CNGA1P29973 690 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 HSPA4P34932 840 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 XRCC4Q13426 336 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 NUGGCQ68CJ6 796 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 PPP1R14BQ96C90 147 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 SPATA32Q96LK8 384 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 PNKPQ96T60 521 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 TRIM4Q9C037 500 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 SIL1Q9H173 461 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 COPRSQ9NQ92 184 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 TPX2Q9ULW0 747 aaKnown RBP13.19□□□□□ -0.3
CCNA1-201ENST00000255465 C15orf41Q9Y2V0 281 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 YDJCA8MPS7 323 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 TPD52L2O43399 206 aaKnown RBP13.19□□□□□ -0.3
CCNA1-201ENST00000255465 E2F6O75461 281 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 PENKP01210 267 aaPredicted RBP13.19□□□□□ -0.3
CCNA1-201ENST00000255465 GNGT1P63211 74 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 ATP8B2P98198 1209 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 METTL24Q5JXM2 366 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 THEMIS2Q5TEJ8 643 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 C11orf57Q6ZUT1 292 aaPredicted RBP13.19□□□□□ -0.3
CCNA1-201ENST00000255465 ATG9AQ7Z3C6 839 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 TXNRD3Q86VQ6 643 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 FAM228AQ86W67 206 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 LSM14AQ8ND56 463 aaKnown RBP13.19□□□□□ -0.3
CCNA1-201ENST00000255465 DHX58Q96C10 678 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 TPCN1Q9ULQ1 816 aa13.19□□□□□ -0.3
CCNA1-201ENST00000255465 G3V3G9 751 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 CREB3O43889 395 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 ECE2O60344 883 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 STX10O60499 249 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 PHACTR2O75167 634 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 SKAP2O75563 359 aaPredicted RBP13.18□□□□□ -0.3
CCNA1-201ENST00000255465 CIAO1O76071 339 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 KLRK1P26718 216 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 CXCL9Q07325 125 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
CCNA1-201ENST00000255465 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
CCNA1-201ENST00000255465 CUL5Q93034 780 aa13.18□□□□□ -0.3
CCNA1-201ENST00000255465 ZNF646O15015 1829 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms