RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 GLIS2Q9BZE0 524 aaPredicted RBP21.58■■□□□ 1.05
TRIM47-201ENST00000254816 ZBTB5O15062 677 aa21.58■■□□□ 1.04
TRIM47-201ENST00000254816 INF2Q27J81 1249 aa21.58■■□□□ 1.04
TRIM47-201ENST00000254816 NBPF12Q5TAG4 269 aaPredicted RBP21.58■■□□□ 1.04
TRIM47-201ENST00000254816 MTMR8Q96EF0 704 aa21.58■■□□□ 1.04
TRIM47-201ENST00000254816 GMCL1Q96IK5 515 aa21.58■■□□□ 1.04
TRIM47-201ENST00000254816 RNF181Q9P0P0 153 aa21.58■■□□□ 1.04
TRIM47-201ENST00000254816 BIN2Q9UBW5 565 aaPredicted RBP21.58■■□□□ 1.04
TRIM47-201ENST00000254816 PHF20L1A8MW92 1017 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 TMEM232C9JQI7 657 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 DDNO94850 711 aaPredicted RBP21.57■■□□□ 1.04
TRIM47-201ENST00000254816 BMP3P12645 472 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 GNA11P29992 359 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 IKQ13123 557 aaPredicted RBP21.57■■□□□ 1.04
TRIM47-201ENST00000254816 TMEM260Q9NX78 707 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 USP25Q9UHP3 1055 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 HPSEQ9Y251 543 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 SRPRBQ9Y5M8 271 aaKnown RBP21.57■■□□□ 1.04
TRIM47-201ENST00000254816 PTGDRQ13258 359 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 TMX2Q9Y320 296 aa21.57■■□□□ 1.04
TRIM47-201ENST00000254816 hCG_1984214I3L0E3 225 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 TRAPPC10P48553 1259 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 HIRAP54198 1017 aaPredicted RBP21.56■■□□□ 1.04
TRIM47-201ENST00000254816 TYRO3Q06418 890 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 QRICH1Q2TAL8 776 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 JAKMIP3Q5VZ66 844 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 ZNF713Q8N859 430 aaPredicted RBP21.56■■□□□ 1.04
TRIM47-201ENST00000254816 CSRNP2Q9H175 543 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 SMCHD1A6NHR9 2005 aa21.56■■□□□ 1.04
TRIM47-201ENST00000254816 CCDC192P0DO97 292 aa21.55■■□□□ 1.04
TRIM47-201ENST00000254816 SYKP43405 635 aa21.55■■□□□ 1.04
TRIM47-201ENST00000254816 CDC37Q16543 378 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-201ENST00000254816 FAM177A1Q8N128 213 aaPredicted RBP21.55■■□□□ 1.04
TRIM47-201ENST00000254816 SDF4Q9BRK5 362 aa21.55■■□□□ 1.04
TRIM47-201ENST00000254816 USP49Q70CQ1 688 aa21.55■■□□□ 1.04
TRIM47-201ENST00000254816 CCDC39Q9UFE4 941 aa21.55■■□□□ 1.04
TRIM47-201ENST00000254816 FZD1Q9UP38 647 aa21.55■■□□□ 1.04
TRIM47-201ENST00000254816 A0A087WWV3 80 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 ESYT2A0FGR8 921 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 ADCY7P51828 1080 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 CTAGE5O15320 804 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 PTMAP06454 111 aaKnown RBP21.54■■□□□ 1.04
TRIM47-201ENST00000254816 ASNSP08243 561 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 ATP2C1P98194 919 aaPredicted RBP21.54■■□□□ 1.04
TRIM47-201ENST00000254816 FAM83BQ5T0W9 1011 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 REXO1Q8N1G1 1221 aaKnown RBP21.54■■□□□ 1.04
TRIM47-201ENST00000254816 GOPCQ9HD26 462 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 GGA3Q9NZ52 723 aa21.54■■□□□ 1.04
TRIM47-201ENST00000254816 FAM237AA0A1B0GTK4 181 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 UBE2SQ16763 222 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 SYDE2Q5VT97 1194 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 SASS6Q6UVJ0 657 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 KCNH3Q9ULD8 1083 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
TRIM47-201ENST00000254816 NONOQ15233 471 aaKnown RBP eCLIP21.53■■□□□ 1.04
TRIM47-201ENST00000254816 UVSSAQ2YD98 709 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 KRT25Q7Z3Z0 450 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 ZKSCAN5Q9Y2L8 839 aa21.53■■□□□ 1.04
TRIM47-201ENST00000254816 VWA3AA6NCI4 1184 aa21.52■■□□□ 1.04
TRIM47-201ENST00000254816 BMP15O95972 392 aa21.52■■□□□ 1.04
TRIM47-201ENST00000254816 ZNF579Q8NAF0 562 aaKnown RBP21.52■■□□□ 1.04
TRIM47-201ENST00000254816 VCPKMTQ9H867 229 aa21.52■■□□□ 1.04
TRIM47-201ENST00000254816 SYNPO2Q9UMS6 1093 aa21.52■■□□□ 1.04
TRIM47-201ENST00000254816 MYH7BA7E2Y1 1941 aa21.52■■□□□ 1.04
TRIM47-201ENST00000254816 INPP5BP32019 993 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 IL17AQ16552 155 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 C9orf131Q5VYM1 1079 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 APOBEC3FQ8IUX4 373 aaKnown RBP21.52■■□□□ 1.03
TRIM47-201ENST00000254816 C4orf32Q8N8J7 132 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 TBCKQ8TEA7 893 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 FAM13BQ9NYF5 915 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 PCDHA1Q9Y5I3 950 aa21.52■■□□□ 1.03
TRIM47-201ENST00000254816 DOCK1Q14185 1865 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 LETM2Q2VYF4 491 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 LONRF3Q496Y0 759 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 ANO6Q4KMQ2 910 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 PPP1R18Q6NYC8 613 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 EPSTI1Q96J88 318 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 ZNF341Q9BYN7 854 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 RIC8AQ9NPQ8 531 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 PRR12Q9ULL5 1215 aa21.51■■□□□ 1.03
TRIM47-201ENST00000254816 MORC2Q9Y6X9 1032 aaPredicted RBP21.51■■□□□ 1.03
TRIM47-201ENST00000254816 ADCY5O95622 1261 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 USH1GQ495M9 461 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 PDILTQ8N807 584 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 FERMT2Q96AC1 680 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 STAT2P52630 851 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 DGKZQ13574 1117 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
TRIM47-201ENST00000254816 BTNL9Q6UXG8 535 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 TMEM60Q9H2L4 133 aa21.5■■□□□ 1.03
TRIM47-201ENST00000254816 POLR2DO15514 142 aaKnown RBP21.49■■□□□ 1.03
TRIM47-201ENST00000254816 CCNT1O60563 726 aaKnown RBP21.49■■□□□ 1.03
TRIM47-201ENST00000254816 PLCB2Q00722 1185 aa21.49■■□□□ 1.03
TRIM47-201ENST00000254816 CUL5Q93034 780 aa21.49■■□□□ 1.03
TRIM47-201ENST00000254816 FEZ1Q99689 392 aa21.49■■□□□ 1.03
TRIM47-201ENST00000254816 DLK2Q6UY11 383 aa21.49■■□□□ 1.03
TRIM47-201ENST00000254816 SYMPKQ92797 1274 aaKnown RBP21.49■■□□□ 1.03
TRIM47-201ENST00000254816 TIGD1Q96MW7 591 aa21.49■■□□□ 1.03
TRIM47-201ENST00000254816 DNAJC25Q9H1X3 360 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms