RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 COL11A1P12107 1806 aaPredicted RBP26.46■■□□□ 1.83
APOE-201ENST00000252486 PLEKHA8P1O95397 391 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 ICAM1P05362 532 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 CDC27P30260 824 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 ADD1P35611 737 aaKnown RBP26.46■■□□□ 1.83
APOE-201ENST00000252486 CDC37Q16543 378 aaPredicted RBP26.46■■□□□ 1.83
APOE-201ENST00000252486 Q3C1V9 767 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 TKFCQ3LXA3 575 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 RIOX2Q8IUF8 465 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 CPXCR1Q8N123 301 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 TSKSQ9UJT2 592 aa26.46■■□□□ 1.83
APOE-201ENST00000252486 CYTH3O43739 400 aa26.45■■□□□ 1.82
APOE-201ENST00000252486 HSPA8P11142 646 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 MAPK4P31152 587 aa26.45■■□□□ 1.82
APOE-201ENST00000252486 CCT2P78371 535 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 LACTBP83111 547 aaPredicted RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 SNRNP48Q6IEG0 339 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 CCDC174Q6PII3 467 aa26.45■■□□□ 1.82
APOE-201ENST00000252486 NOL8Q76FK4 1167 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 NBPF11Q86T75 865 aa26.45■■□□□ 1.82
APOE-201ENST00000252486 RRP36Q96EU6 259 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 MOV10L1Q9BXT6 1211 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 MROH8Q9H579 483 aa26.45■■□□□ 1.82
APOE-201ENST00000252486 RAVER2Q9HCJ3 691 aaKnown RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 SH2B1Q9NRF2 756 aaPredicted RBP26.45■■□□□ 1.82
APOE-201ENST00000252486 CPLX1O14810 134 aa26.44■■□□□ 1.82
APOE-201ENST00000252486 ZBTB5O15062 677 aa26.44■■□□□ 1.82
APOE-201ENST00000252486 STK3Q13188 491 aa26.44■■□□□ 1.82
APOE-201ENST00000252486 ZNF296Q8WUU4 475 aaPredicted RBP26.44■■□□□ 1.82
APOE-201ENST00000252486 RBM27Q9P2N5 1060 aaKnown RBP26.44■■□□□ 1.82
APOE-201ENST00000252486 SEC63Q9UGP8 760 aaKnown RBP26.44■■□□□ 1.82
APOE-201ENST00000252486 ZNF536O15090 1300 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 PNMA6FA0A0J9YX94 578 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 CDKL5O76039 1030 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 IFNAR1P17181 557 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 ME3Q16798 604 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 SLC35G1Q2M3R5 365 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 QRICH1Q2TAL8 776 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 NCOA5Q9HCD5 579 aaKnown RBP26.43■■□□□ 1.82
APOE-201ENST00000252486 CCPG1Q9ULG6 757 aa26.43■■□□□ 1.82
APOE-201ENST00000252486 FCGRTP55899 365 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 SNAP25P60880 206 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 FUT2Q10981 343 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 FBXO11Q86XK2 927 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 HOMER1Q86YM7 354 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 PIGSQ96S52 555 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 AMNQ9BXJ7 453 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 CWC22Q9HCG8 908 aaKnown RBP26.42■■□□□ 1.82
APOE-201ENST00000252486 FBXO40Q9UH90 709 aa26.42■■□□□ 1.82
APOE-201ENST00000252486 CNTNAP5Q8WYK1 1306 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 PEX10O60683 326 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 SCRN1Q12765 414 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 NCAPG2Q86XI2 1143 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 CMTR1Q8N1G2 835 aaKnown RBP26.41■■□□□ 1.82
APOE-201ENST00000252486 CCDC82Q8N4S0 544 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 CHST13Q8NET6 341 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 GTF3C6Q969F1 213 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 AGBL1Q96MI9 1066 aa26.41■■□□□ 1.82
APOE-201ENST00000252486 GNRH1P01148 92 aa26.4■■□□□ 1.82
APOE-201ENST00000252486 ERCC3P19447 782 aa26.4■■□□□ 1.82
APOE-201ENST00000252486 PSMC4P43686 418 aa26.4■■□□□ 1.82
APOE-201ENST00000252486 AKAP17AQ02040 695 aaKnown RBP26.4■■□□□ 1.82
APOE-201ENST00000252486 NTRK3Q16288 839 aa26.4■■□□□ 1.82
APOE-201ENST00000252486 TRIM22Q8IYM9 498 aa26.4■■□□□ 1.82
APOE-201ENST00000252486 RNF26Q9BY78 433 aaPredicted RBP26.4■■□□□ 1.82
APOE-201ENST00000252486 PORCNQ9H237 461 aa26.4■■□□□ 1.82
APOE-201ENST00000252486 ABCB11O95342 1321 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 STRNO43815 780 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 LARGE1O95461 756 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 FMNL1O95466 1100 aaPredicted RBP26.39■■□□□ 1.82
APOE-201ENST00000252486 ALAS1P13196 640 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 CD99L2Q8TCZ2 262 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 COA7Q96BR5 231 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 EFCC1Q9HA90 598 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 IVNS1ABPQ9Y6Y0 642 aa26.39■■□□□ 1.82
APOE-201ENST00000252486 MYH6P13533 1939 aa26.39■■□□□ 1.81
APOE-201ENST00000252486 TNPO2O14787 897 aaKnown RBP26.38■■□□□ 1.81
APOE-201ENST00000252486 PRPF3O43395 683 aaKnown RBP26.38■■□□□ 1.81
APOE-201ENST00000252486 HOXD10P28358 340 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 SLC4A3P48751 1232 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 LBX1P52954 281 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 WDR78Q5VTH9 848 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.38■■□□□ 1.814e-7■■■□□ 17.8
APOE-201ENST00000252486 PLEKHH3Q7Z736 793 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 ABRAQ8N0Z2 381 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 NECAB1Q8N987 351 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 TRERF1Q96PN7 1200 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 MAF1Q9H063 256 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 ACAD9Q9H845 621 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 RNF146Q9NTX7 359 aa26.38■■□□□ 1.81
APOE-201ENST00000252486 MRPL11Q9Y3B7 192 aaKnown RBP26.38■■□□□ 1.81
APOE-201ENST00000252486 V9GY48 417 aaPredicted RBP26.38■■□□□ 1.81
APOE-201ENST00000252486 MGAMO43451 1857 aa26.37■■□□□ 1.81
APOE-201ENST00000252486 hCG_1984214I3L0E3 225 aa26.37■■□□□ 1.81
APOE-201ENST00000252486 SSRP1Q08945 709 aaKnown RBP26.37■■□□□ 1.81
APOE-201ENST00000252486 GPR142Q7Z601 462 aa26.37■■□□□ 1.81
APOE-201ENST00000252486 ZNF713Q8N859 430 aaPredicted RBP26.37■■□□□ 1.81
APOE-201ENST00000252486 PIBF1Q8WXW3 757 aa26.37■■□□□ 1.81
APOE-201ENST00000252486 RIPK3Q9Y572 518 aa26.37■■□□□ 1.81
APOE-201ENST00000252486 PCDHA1Q9Y5I3 950 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms