RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 VIPAS39Q9H9C1 493 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 LRRC4BQ9NT99 713 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 BICDL2A1A5D9 508 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 NKRFO15226 690 aaKnown RBP eCLIP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 TADA3O75528 432 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 DDAH1O94760 285 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 DEXIO95424 95 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 POLR3DP05423 398 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 PLCD1P51178 756 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 FKBP4Q02790 459 aaKnown RBP eCLIP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 EP400NLQ6ZTU2 488 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 FAM76AQ8TAV0 307 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 CLIC6Q96NY7 704 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 PURBQ96QR8 312 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 NUP88Q99567 741 aaPredicted RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 HAUS4Q9H6D7 363 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 ADD3Q9UEY8 706 aaKnown RBP4.66□□□□□ -1.66
UBE4A-201ENST00000252108 SMCHD1A6NHR9 2005 aa4.66□□□□□ -1.66
UBE4A-201ENST00000252108 BTBD18B2RXH4 712 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 N4BP3O15049 544 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 HSF2BPO75031 334 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 TACC1O75410 805 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 GPTP24298 496 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 ARHGAP25P42331 645 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 GUCY1B3Q02153 619 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 PPFIA1Q13136 1202 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 POSTNQ15063 836 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 IFI16Q16666 785 aaKnown RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF654Q8IZM8 581 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC43Q96MW1 224 aaKnown RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 NENFQ9UMX5 172 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 PCDHA5Q9Y5H7 936 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 IFIT3O14879 490 aaKnown RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 AMPD2Q01433 879 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 NR5A1Q13285 461 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 RTN1Q16799 776 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 SPATA1Q5VX52 437 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 MAGEB6Q8N7X4 407 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 IQUBQ8NA54 791 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 VPS18Q9P253 973 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 TRMT112Q9UI30 125 aaKnown RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 REXO2Q9Y3B8 237 aaKnown RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 ATRNL1Q5VV63 1379 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 TNKSO95271 1327 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 FAM177BA6PVY3 158 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 TMEM232C9JQI7 657 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 MYL1P05976 194 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 CALML3P27482 149 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 C12orf60Q5U649 245 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 CROCCP2Q86T23 111 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 MMTAG2Q9BU76 263 aaKnown RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 CNNM1Q9NRU3 951 aa4.65□□□□□ -1.66
UBE4A-201ENST00000252108 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.65□□□□□ -1.66
UBE4A-201ENST00000252108 GOLGA8KD6RF30 607 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 EXOC5O00471 708 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 PLEKHA8P1O95397 391 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 SMARCA1P28370 1054 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 NAA30Q147X3 362 aaPredicted RBP4.65□□□□□ -1.67
UBE4A-201ENST00000252108 GPR162Q16538 588 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 PFKFB3Q16875 520 aaPredicted RBP4.65□□□□□ -1.67
UBE4A-201ENST00000252108 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
UBE4A-201ENST00000252108 RPAINQ86UA6 219 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 IGSF22Q8N9C0 903 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 RETREG2Q8NC44 543 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 MBOAT7Q96N66 472 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 GSDMAQ96QA5 445 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 MAGEF1Q9HAY2 307 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 SH3GLB2Q9NR46 395 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 MAGEA9P43362 315 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 GNAQP50148 359 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 LONRF2Q1L5Z9 754 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF569Q5MCW4 686 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 IQCA1Q86XH1 822 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 ZSCAN10Q96SZ4 725 aaPredicted RBP4.65□□□□□ -1.67
UBE4A-201ENST00000252108 LIMA1Q9UHB6 759 aaKnown RBP4.65□□□□□ -1.67
UBE4A-201ENST00000252108 NFE2L3Q9Y4A8 694 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 FHOD1Q9Y613 1164 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 SYNRGQ9UMZ2 1314 aa4.65□□□□□ -1.67
UBE4A-201ENST00000252108 A0A087WUV0 522 aaPredicted RBP4.64□□□□□ -1.67
UBE4A-201ENST00000252108 GOLGA6L10A0A0M3HER8 536 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 PSMA7O14818 248 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 KIF5BP33176 963 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 MECOMQ03112 1051 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 PNOCQ13519 176 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 WTAPQ15007 396 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 MFSD6Q6ZSS7 791 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 CATIPQ7Z7H3 387 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 FMNL3Q8IVF7 1028 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 ZSCAN29Q8IWY8 852 aaPredicted RBP4.64□□□□□ -1.67
UBE4A-201ENST00000252108 CDC5LQ99459 802 aaKnown RBP4.64□□□□□ -1.67
UBE4A-201ENST00000252108 MYL10Q9BUA6 226 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 KBTBD4Q9NVX7 518 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 MYO3BQ8WXR4 1341 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 TDO2P48775 406 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 MCM6Q14566 821 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF572Q7Z3I7 529 aaPredicted RBP4.64□□□□□ -1.67
UBE4A-201ENST00000252108 PROM2Q8N271 834 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 GIMAP7Q8NHV1 300 aa4.64□□□□□ -1.67
UBE4A-201ENST00000252108 TAF4BQ92750 862 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms