RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 DAGLBQ8NCG7 672 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 ACER1Q8TDN7 264 aa26.66■■□□□ 1.86
SYNGR3-201ENST00000248121 SLC16A2P36021 539 aa26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 TRAPPC10P48553 1259 aa26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 CCDC96Q2M329 555 aa26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 DHX40Q8IX18 779 aaKnown RBP26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 PIGSQ96S52 555 aa26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 NUP88Q99567 741 aaPredicted RBP26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 CCDC39Q9UFE4 941 aa26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 TUBE1Q9UJT0 475 aa26.65■■□□□ 1.86
SYNGR3-201ENST00000248121 CAP2P40123 477 aa26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 ASPRV1Q53RT3 343 aa26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 KIAA1755Q5JYT7 1200 aa26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 GLIS2Q9BZE0 524 aaPredicted RBP26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 RIOX1Q9H6W3 641 aa26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 PCDHA6Q9UN73 950 aa26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 PCDHA8Q9Y5H6 950 aa26.64■■□□□ 1.86
SYNGR3-201ENST00000248121 BMP15O95972 392 aa26.64■■□□□ 1.85
SYNGR3-201ENST00000248121 ATP2C1P98194 919 aaPredicted RBP26.64■■□□□ 1.85
SYNGR3-201ENST00000248121 PNOCQ13519 176 aa26.64■■□□□ 1.85
SYNGR3-201ENST00000248121 CCDC148Q8NFR7 591 aa26.64■■□□□ 1.85
SYNGR3-201ENST00000248121 FAM13BQ9NYF5 915 aa26.64■■□□□ 1.85
SYNGR3-201ENST00000248121 SSC5DA1L4H1 1573 aa26.63■■□□□ 1.85
SYNGR3-201ENST00000248121 BIN1O00499 593 aa26.63■■□□□ 1.85
SYNGR3-201ENST00000248121 PTGDRQ13258 359 aa26.63■■□□□ 1.85
SYNGR3-201ENST00000248121 SLFN13Q68D06 897 aa26.63■■□□□ 1.85
SYNGR3-201ENST00000248121 FOXN1O15353 648 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 MDM2Q00987 491 aaPredicted RBP26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 RRP36Q96EU6 259 aaKnown RBP26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 F5H6K3 240 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 POLR2DO15514 142 aaKnown RBP26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 NDUFB10O96000 172 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 KLRC3Q07444 240 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 GALNT17Q6IS24 598 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 CEP57L1Q8IYX8 460 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 CNNM3Q8NE01 707 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 ZMYND12Q9H0C1 365 aa26.62■■□□□ 1.85
SYNGR3-201ENST00000248121 NLRP12P59046 1061 aa26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 ELOA2Q8IYF1 753 aaPredicted RBP26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 SPICE1Q8N0Z3 855 aa26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 FAM177A1Q8N128 213 aaPredicted RBP26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 FERMT2Q96AC1 680 aa26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 EPSTI1Q96J88 318 aa26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 DOCK1Q14185 1865 aa26.61■■□□□ 1.85
SYNGR3-201ENST00000248121 A0A087X0B3 334 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 MCM7P33993 719 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 CLCN1P35523 988 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 SLC1A4P43007 532 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 APOBEC3FQ8IUX4 373 aaKnown RBP26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 ADGRF4Q8IZF3 695 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 C4orf32Q8N8J7 132 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 JMJD4Q9H9V9 463 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 SERTAD1Q9UHV2 236 aa26.6■■□□□ 1.85
SYNGR3-201ENST00000248121 PTMAP06454 111 aaKnown RBP26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 INPP5BP32019 993 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 NAPAP54920 295 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 IL17AQ16552 155 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 PPP4R3BQ5MIZ7 849 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 ACTN4O43707 911 aaKnown RBP26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 ZYXQ15942 572 aaKnown RBP26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 PDILTQ8N807 584 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 GMCL1P1Q8NEA9 526 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 ADARB2Q9NS39 739 aaKnown RBP26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 ZKSCAN5Q9Y2L8 839 aa26.59■■□□□ 1.85
SYNGR3-201ENST00000248121 USP17L10C9JJH3 530 aa26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 PPP1R11O60927 126 aaPredicted RBP26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 LMOD1P29536 600 aaPredicted RBP26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 ISM2Q6H9L7 571 aa26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 PLA2G4DQ86XP0 818 aa26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 AOPEPQ8N6M6 819 aa26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 SYMPKQ92797 1274 aaKnown RBP26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 SEC63Q9UGP8 760 aaKnown RBP26.58■■□□□ 1.85
SYNGR3-201ENST00000248121 CCDC194A0A1B0GVG4 234 aa26.58■■□□□ 1.84
SYNGR3-201ENST00000248121 GPATCH4Q5T3I0 446 aaKnown RBP26.58■■□□□ 1.84
SYNGR3-201ENST00000248121 DCAF4Q8WV16 495 aa26.58■■□□□ 1.84
SYNGR3-201ENST00000248121 PCDHA5Q9Y5H7 936 aa26.58■■□□□ 1.84
SYNGR3-201ENST00000248121 VWA3AA6NCI4 1184 aa26.57■■□□□ 1.84
SYNGR3-201ENST00000248121 BPIFA3Q9BQP9 254 aa26.57■■□□□ 1.84
SYNGR3-201ENST00000248121 NAT10Q9H0A0 1025 aaKnown RBP26.57■■□□□ 1.84
SYNGR3-201ENST00000248121 SMCO2A6NFE2 343 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 GOLGA6L19H0YKK7 550 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 PRR29P0C7W0 189 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 ZNF75DP51815 510 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 ZRSR1Q15695 479 aaKnown RBP26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 INF2Q27J81 1249 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 TMX2Q9Y320 296 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 SNAP25P60880 206 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 DGKZQ13574 1117 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 CCDC12Q8WUD4 166 aaPredicted RBP26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 COA7Q96BR5 231 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 ARHGEF10LQ9HCE6 1279 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 SMCHD1A6NHR9 2005 aa26.56■■□□□ 1.84
SYNGR3-201ENST00000248121 BECN2A8MW95 431 aa26.55■■□□□ 1.84
SYNGR3-201ENST00000248121 POSTNQ15063 836 aa26.55■■□□□ 1.84
SYNGR3-201ENST00000248121 SARM1Q6SZW1 724 aa26.55■■□□□ 1.84
SYNGR3-201ENST00000248121 GRAMD1CQ8IYS0 662 aa26.55■■□□□ 1.84
SYNGR3-201ENST00000248121 GMCL1Q96IK5 515 aa26.55■■□□□ 1.84
SYNGR3-201ENST00000248121 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.55■■□□□ 1.843e-7■■□□□ 12.7
SYNGR3-201ENST00000248121 ADM5C9JUS6 153 aa26.54■■□□□ 1.84
SYNGR3-201ENST00000248121 TRIM5Q9C035 493 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms