RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TEX35Q5T0J7 233 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 IRF2BP1Q8IU81 584 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 CERS3Q8IU89 383 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 GOLGA1Q92805 767 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 SPZ1Q9BXG8 430 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 KBTBD4Q9NVX7 518 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 MAPK8IP1Q9UQF2 711 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 SNED1Q8TER0 1413 aa24.36■■□□□ 1.49
SH2D3A-201ENST00000245908 UBA7P41226 1012 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 SLC20A2Q08357 652 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 PDE4CQ08493 712 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 CYP26C1Q6V0L0 522 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 MAPKAPK5Q8IW41 473 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 ZNF287Q9HBT7 754 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 STX8Q9UNK0 236 aa24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 RNF225M0QZC1 329 aaPredicted RBP24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 PARP1P09874 1014 aaKnown RBP24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 IRX5P78411 483 aaPredicted RBP24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 NUP88Q99567 741 aaPredicted RBP24.35■■□□□ 1.49
SH2D3A-201ENST00000245908 RHOBTB3O94955 611 aa24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 TUBB2AQ13885 445 aa24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 RASSF8Q8NHQ8 419 aa24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 TUBB2BQ9BVA1 445 aa24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 ZMYND12Q9H0C1 365 aa24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 EPC1Q9H2F5 836 aa24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 SAP30BPQ9UHR5 308 aaKnown RBP24.34■■□□□ 1.49
SH2D3A-201ENST00000245908 PLA2G4AP47712 749 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 ACRBPQ8NEB7 543 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 MAGEF1Q9HAY2 307 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 CALCOCO1Q9P1Z2 691 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 TRIM49BA6NDI0 452 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 KLRF2D3W0D1 207 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 UBXN1Q04323 297 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 ZNF569Q5MCW4 686 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 C16orf86Q6ZW13 317 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 CUEDC2Q9H467 287 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 THAP9Q9H5L6 903 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 CDC23Q9UJX2 597 aa24.33■■□□□ 1.49
SH2D3A-201ENST00000245908 EEF1GP26641 437 aaKnown RBP24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 RFC4P35249 363 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 STIM1Q13586 685 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 CC2D1AQ6P1N0 951 aaPredicted RBP24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 SRGAP1Q7Z6B7 1085 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 GIMAP8Q8ND71 665 aaPredicted RBP24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 AK8Q96MA6 479 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 ST7Q9NRC1 585 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 MTMR7Q9Y216 660 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 FLT1P17948 1338 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 KRT9P35527 623 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 BTDP43251 543 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 KRT25Q7Z3Z0 450 aa24.32■■□□□ 1.48
SH2D3A-201ENST00000245908 THSD7AQ9UPZ6 1657 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 A0A1W2PQC6 194 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 LGALS16A8MUM7 142 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 SEC31AO94979 1220 aaKnown RBP24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 GOLGA8HP0CJ92 632 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 CDK8P49336 464 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 PMS1P54277 932 aaKnown RBP24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 CNBD1Q8NA66 436 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 NEDD1Q8NHV4 660 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 LRRC15Q8TF66 581 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 NGLY1Q96IV0 654 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 C8orf37Q96NL8 207 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 GPR101Q96P66 508 aaPredicted RBP24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 EYA3Q99504 573 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 GPR75-ASB3A0A0A6YYF3 556 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 PSMA7O14818 248 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 MB21D1Q8N884 522 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 PARD6BQ9BYG5 372 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 MYO1AQ9UBC5 1043 aa24.31■■□□□ 1.48
SH2D3A-201ENST00000245908 OR52Z1P0C646 297 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 NAPAP54920 295 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 GPSM2P81274 684 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 TRAPPC3LQ5T215 181 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 JAKMIP3Q5VZ66 844 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 CEP112Q8N8E3 955 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 ZNF507Q8TCN5 953 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 CTAGE9A4FU28 777 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 ARHGAP25P42331 645 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 CHMP4BP1P59074 171 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 NONOQ15233 471 aaKnown RBP eCLIP24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 CABP7Q86V35 215 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 SLC35F6Q8N357 371 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 NOC3LQ8WTT2 800 aaKnown RBP24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 CD209Q9NNX6 404 aa24.3■■□□□ 1.48
SH2D3A-201ENST00000245908 TBC1D8O95759 1140 aa24.29■■□□□ 1.48
SH2D3A-201ENST00000245908 SMARCA1P28370 1054 aa24.29■■□□□ 1.48
SH2D3A-201ENST00000245908 TTI2Q6NXR4 508 aa24.29■■□□□ 1.48
SH2D3A-201ENST00000245908 TEX11Q8IYF3 940 aa24.29■■□□□ 1.48
SH2D3A-201ENST00000245908 PLIN2Q99541 437 aa24.29■■□□□ 1.48
SH2D3A-201ENST00000245908 C6orf50Q9HD87 102 aa24.29■■□□□ 1.48
SH2D3A-201ENST00000245908 PLCG1P19174 1290 aa24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 IPO4Q8TEX9 1081 aaKnown RBP24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 DHTKD1Q96HY7 919 aaPredicted RBP24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 TRIM47Q96LD4 638 aa24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 CPVLQ9H3G5 476 aa24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 IL1R1P14778 569 aa24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 PLCG2P16885 1265 aa24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 GNA11P29992 359 aa24.28■■□□□ 1.48
SH2D3A-201ENST00000245908 KIF4BQ2VIQ3 1234 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms