RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 JAKMIP3Q5VZ66 844 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 ANO1Q5XXA6 986 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 BRAPQ7Z569 592 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 TMEM87AQ8NBN3 555 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 LINC00301Q8NCQ3 95 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 TBC1D5Q92609 795 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 P2RX7Q99572 595 aaKnown RBP14.82□□□□□ -0.04
HIF3A-201ENST00000244302 RCOR1Q9UKL0 485 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 PCDHA4Q9UN74 947 aa14.82□□□□□ -0.04
HIF3A-201ENST00000244302 STAT2P52630 851 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 ZNF174Q15697 407 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 PNMA8AQ86V59 439 aaPredicted RBP14.81□□□□□ -0.04
HIF3A-201ENST00000244302 KIAA1683Q9H0B3 1180 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 ZMYND12Q9H0C1 365 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 AFG3L2Q9Y4W6 797 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 PCDHA1Q9Y5I3 950 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 PPP1R12BO60237 982 aaPredicted RBP14.81□□□□□ -0.04
HIF3A-201ENST00000244302 LIG1P18858 919 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L24Q0WX57 530 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 PTPAQ15257 358 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 CAVIN1Q6NZI2 390 aaKnown RBP14.81□□□□□ -0.04
HIF3A-201ENST00000244302 USP17L6PQ6QN14 398 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 BTNL9Q6UXG8 535 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 CLIC6Q96NY7 704 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 RTEL1Q9NZ71 1219 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 PCDHA7Q9UN72 937 aa14.81□□□□□ -0.04
HIF3A-201ENST00000244302 EDIL3O43854 480 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 NASPP49321 788 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-201ENST00000244302 SPECC1Q5M775 1068 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 ZNF396Q96N95 335 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-201ENST00000244302 WDR18Q9BV38 432 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 TANGO6Q9C0B7 1094 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 RPAP3Q9H6T3 665 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-201ENST00000244302 SH3GLB2Q9NR46 395 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 TMEM63CQ9P1W3 806 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 CFAP45Q9UL16 551 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 OPLAHO14841 1288 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 IRF6O14896 467 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 INF2Q27J81 1249 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 AGBL1Q96MI9 1066 aa14.8□□□□□ -0.04
HIF3A-201ENST00000244302 SCAND2PQ9GZW5 306 aaPredicted RBP14.8□□□□□ -0.04
HIF3A-201ENST00000244302 STK38Q15208 465 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 WDR90Q96KV7 1748 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 UIMC1Q96RL1 719 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 GOLPH3LQ9H4A5 285 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 SCN4AP35499 1836 aa14.79□□□□□ -0.04
HIF3A-201ENST00000244302 FLOT1O75955 427 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 ME1P48163 572 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 MKRN3Q13064 507 aaKnown RBP14.78□□□□□ -0.04
HIF3A-201ENST00000244302 NOL9Q5SY16 702 aaKnown RBP14.78□□□□□ -0.04
HIF3A-201ENST00000244302 POTEEQ6S8J3 1075 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 POLR3EQ9NVU0 708 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.78□□□□□ -0.04
HIF3A-201ENST00000244302 SPTLC2O15270 562 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 HOXA13P31271 388 aaPredicted RBP14.78□□□□□ -0.04
HIF3A-201ENST00000244302 GJA5P36382 358 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 UBE2HP62256 183 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 SLC39A14Q15043 492 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 FBXO11Q86XK2 927 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
HIF3A-201ENST00000244302 ZNF536O15090 1300 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 DOCK1Q14185 1865 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 MCM7P33993 719 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 IREB2P48200 963 aaKnown RBP14.77□□□□□ -0.04
HIF3A-201ENST00000244302 ZSCAN23Q3MJ62 389 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 HS1BP3Q53T59 392 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 AXDND1Q5T1B0 1012 aaPredicted RBP14.77□□□□□ -0.04
HIF3A-201ENST00000244302 RGS22Q8NE09 1264 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 ATG4CQ96DT6 458 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 PSTPIP2Q9H939 334 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 SYNPO2Q9UMS6 1093 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 CSADQ9Y600 493 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 MYH15Q9Y2K3 1946 aa14.77□□□□□ -0.04
HIF3A-201ENST00000244302 PHIPQ8WWQ0 1821 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 A0A1B0GVL5 298 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 NR1I2O75469 434 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 CALML3P27482 149 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 ADCY7P51828 1080 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 ZFP91Q96JP5 570 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-201ENST00000244302 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-201ENST00000244302 AMNQ9BXJ7 453 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 RANBP17Q9H2T7 1088 aaKnown RBP14.77□□□□□ -0.05
HIF3A-201ENST00000244302 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
HIF3A-201ENST00000244302 BRMS1Q9HCU9 246 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 C6orf50Q9HD87 102 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 FEM1BQ9UK73 627 aa14.77□□□□□ -0.05
HIF3A-201ENST00000244302 ELP1O95163 1332 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms