RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 CPLX2Q6PUV4 134 aaKnown RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 REPS2Q8NFH8 660 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 GPRC5AQ8NFJ5 357 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 PHKBQ93100 1093 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 RRP36Q96EU6 259 aaKnown RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 PIGSQ96S52 555 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 PAGR1Q9BTK6 254 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
HMGCL-201ENST00000235958 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 RAVER2Q9HCJ3 691 aaKnown RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 COL11A1P12107 1806 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-201ENST00000235958 ATP2A1O14983 1001 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 ZBTB5O15062 677 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 PRPF3O43395 683 aaKnown RBP11.78□□□□□ -0.52
HMGCL-201ENST00000235958 BCRP11274 1271 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 STAT3P40763 770 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 PLS1Q14651 629 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 CDC37Q16543 378 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-201ENST00000235958 QRICH1Q2TAL8 776 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 HOMER1Q86YM7 354 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 JMYQ8N9B5 988 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 AGBL1Q96MI9 1066 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 CFHR5Q9BXR6 569 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 SLC26A6Q9BXS9 759 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 SPATC1LQ9H0A9 340 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 MORF4L1Q9UBU8 362 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 ZNF214Q9UL59 606 aaPredicted RBP11.78□□□□□ -0.52
HMGCL-201ENST00000235958 ZNF536O15090 1300 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 ADGRA2Q96PE1 1338 aa11.78□□□□□ -0.52
HMGCL-201ENST00000235958 DOCK3Q8IZD9 2030 aa11.77□□□□□ -0.52
HMGCL-201ENST00000235958 K7ELQ4 463 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-201ENST00000235958 PPP1R11O60927 126 aaPredicted RBP11.77□□□□□ -0.53
HMGCL-201ENST00000235958 CDKL5O76039 1030 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 OAZ1P54368 228 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 ERVK-9P63128 1117 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 ERVK-24P63145 666 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
HMGCL-201ENST00000235958 FBXO11Q86XK2 927 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
HMGCL-201ENST00000235958 LLPHQ9BRT6 129 aaKnown RBP11.77□□□□□ -0.53
HMGCL-201ENST00000235958 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 SAGE1Q9NXZ1 904 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 RIPK3Q9Y572 518 aa11.77□□□□□ -0.53
HMGCL-201ENST00000235958 FMNL1O95466 1100 aaPredicted RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 ICAM1P05362 532 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 ALAS1P13196 640 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 FDPSP14324 419 aaKnown RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 CUL4AQ13619 759 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 PKN1Q16512 942 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 FAM110CQ1W6H9 321 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 SNRNP48Q6IEG0 339 aaKnown RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 RIOX2Q8IUF8 465 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 HSCBQ8IWL3 235 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 TRIM22Q8IYM9 498 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 COA7Q96BR5 231 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 AMNQ9BXJ7 453 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 MOV10L1Q9BXT6 1211 aaKnown RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 TEX13BQ9BXU2 312 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 RNF26Q9BY78 433 aaPredicted RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 SEC63Q9UGP8 760 aaKnown RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 CCPG1Q9ULG6 757 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 PCDHA1Q9Y5I3 950 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 CNTNAP5Q8WYK1 1306 aa11.76□□□□□ -0.53
HMGCL-201ENST00000235958 ZNFX1Q9P2E3 1918 aaKnown RBP11.76□□□□□ -0.53
HMGCL-201ENST00000235958 GPR25O00155 361 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 JAK2O60674 1132 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 SLC25A27O95847 323 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 TAL1P17542 331 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-201ENST00000235958 CCNA1P78396 465 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 SP3Q02447 781 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
HMGCL-201ENST00000235958 USH1GQ495M9 461 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
HMGCL-201ENST00000235958 SMARCC2Q8TAQ2 1214 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 TRERF1Q96PN7 1200 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 PORCNQ9H237 461 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
HMGCL-201ENST00000235958 TSKSQ9UJT2 592 aa11.75□□□□□ -0.53
HMGCL-201ENST00000235958 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
HMGCL-201ENST00000235958 PTPDC1A2A3K4 754 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 ECM2O94769 699 aaPredicted RBP11.74□□□□□ -0.53
HMGCL-201ENST00000235958 DEXIO95424 95 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 SCG2P13521 617 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 ERCC3P19447 782 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 TRAF1Q13077 416 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 TKFCQ3LXA3 575 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 MUM1L1Q5H9M0 696 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 NCAPG2Q86XI2 1143 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 CLEC4DQ8WXI8 215 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 MROH8Q9H579 483 aa11.74□□□□□ -0.53
HMGCL-201ENST00000235958 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms