RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 IFIH1Q9BYX4 1025 aaKnown RBP20.85■□□□□ 0.93
SMPD3-201ENST00000219334 CCDC160A6NGH7 325 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 HPDP32754 393 aaPredicted RBP20.85■□□□□ 0.93
SMPD3-201ENST00000219334 RETREG2Q8NC44 543 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 ANKFY1Q9P2R3 1169 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 AMFRQ9UKV5 643 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 CIB2O75838 187 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 IREB2P48200 963 aaKnown RBP20.84■□□□□ 0.93
SMPD3-201ENST00000219334 RSAD2Q8WXG1 361 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 SLF1Q9BQI6 1058 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 DHX36Q9H2U1 1008 aaKnown RBP20.84■□□□□ 0.93
SMPD3-201ENST00000219334 RAB20Q9NX57 234 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 ZNF75DP51815 510 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 EXOC8Q8IYI6 725 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 CCDC127Q96BQ5 260 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 LRFN2Q9ULH4 789 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 RABGAP1Q9Y3P9 1069 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 SPDYE16A6NNV3 312 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-201ENST00000219334 POLR2BP30876 1174 aaKnown RBP20.84■□□□□ 0.93
SMPD3-201ENST00000219334 PTH1RQ03431 593 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 SPDYE2Q495Y8 402 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 LONRF3Q496Y0 759 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 RTKN2Q8IZC4 609 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 SLC7A3Q8WY07 619 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 ADORA1P30542 326 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 CYP4A11Q02928 519 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 LRCH2Q5VUJ6 765 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 CIAPIN1Q6FI81 312 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 ZBTB9Q96C00 473 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 APOL6Q9BWW8 343 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 SERPINB13Q9UIV8 391 aa20.84■□□□□ 0.93
SMPD3-201ENST00000219334 LACTBP83111 547 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-201ENST00000219334 MYOM2P54296 1465 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 PFKFB1P16118 471 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 SEPT9Q9UHD8 586 aaPredicted RBP20.83■□□□□ 0.93
SMPD3-201ENST00000219334 AKT3Q9Y243 479 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 TACC3Q9Y6A5 838 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 CLCN1P35523 988 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 HHATQ5VTY9 493 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 SEC31BQ9NQW1 1179 aa20.83■□□□□ 0.93
SMPD3-201ENST00000219334 DTNBO60941 627 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 PDE6CP51160 858 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 MTX1Q13505 466 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 FAM26FQ5R3K3 315 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 POMGNT1Q8WZA1 660 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 CACYBPQ9HB71 228 aaKnown RBP20.83■□□□□ 0.92
SMPD3-201ENST00000219334 NPR1P16066 1061 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 MAN1A1P33908 653 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 KCNQ4P56696 695 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 MAPK8IP2Q13387 824 aaPredicted RBP20.83■□□□□ 0.92
SMPD3-201ENST00000219334 SLC17A8Q8NDX2 589 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 HAUS1Q96CS2 278 aa20.83■□□□□ 0.92
SMPD3-201ENST00000219334 ERVV-1B6SEH8 477 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 TTLL6Q8N841 843 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 PSMB7Q99436 277 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 EFCAB6Q5THR3 1501 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 ZMYM4Q5VZL5 1548 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 ABCB4P21439 1286 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 NOC2LQ9Y3T9 749 aaKnown RBP20.82■□□□□ 0.92
SMPD3-201ENST00000219334 NLRP1Q9C000 1473 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 RUFY4Q6ZNE9 571 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 ATP2A3Q93084 1043 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 CDHR1Q96JP9 859 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 BTBD18B2RXH4 712 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 KCNJ18B7U540 433 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 NOL3O60936 208 aaKnown RBP20.82■□□□□ 0.92
SMPD3-201ENST00000219334 GDF11O95390 407 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 KRT15P19012 456 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 KCNJ12Q14500 433 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 ODR4Q5SWX8 454 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 PPM1KQ8N3J5 372 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 SSH2Q76I76 1423 aa20.82■□□□□ 0.92
SMPD3-201ENST00000219334 SDCCAG8Q86SQ7 713 aaPredicted RBP20.81■□□□□ 0.92
SMPD3-201ENST00000219334 ZNF577Q9BSK1 485 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 METP08581 1390 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 IFNB1P01574 187 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 ITKQ08881 620 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 PLCB4Q15147 1175 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 BMP3P12645 472 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 LONP1P36776 959 aaKnown RBP20.81■□□□□ 0.92
SMPD3-201ENST00000219334 ADAM9Q13443 819 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 PROSER3Q2NL68 480 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 STMN2Q93045 179 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 CCDC51Q96ER9 411 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 ERO1AQ96HE7 468 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 HNRNPDLO14979 420 aaKnown RBP20.81■□□□□ 0.92
SMPD3-201ENST00000219334 LONRF2Q1L5Z9 754 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 VPS37BQ9H9H4 285 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 GTPBP6O43824 516 aaPredicted RBP20.81■□□□□ 0.92
SMPD3-201ENST00000219334 PAK2Q13177 524 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 PPFIBP2Q8ND30 876 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 NACC1Q96RE7 527 aa20.81■□□□□ 0.92
SMPD3-201ENST00000219334 I3L4J1 428 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 MORC3Q14149 939 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 MIS18BP1Q6P0N0 1132 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 ZHX1Q9UKY1 873 aaPredicted RBP20.8■□□□□ 0.92
SMPD3-201ENST00000219334 MUM1L1Q5H9M0 696 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 SLC10A4Q96EP9 437 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms