RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FAM102BQ5T8I3 360 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 GOLGA5Q8TBA6 731 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 FAM193BQ96PV7 902 aaPredicted RBP15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 ANGPTL2Q9UKU9 493 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 CARSP49589 748 aaKnown RBP15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 DDX42Q86XP3 938 aaKnown RBP eCLIP15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 TMCO5AQ8N6Q1 288 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 CSPG5O95196 566 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 SESTD1Q86VW0 696 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 CERS3Q8IU89 383 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 ST13P4Q8IZP2 240 aaPredicted RBP15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 ZNF653Q96CK0 615 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 HECW1Q76N89 1606 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 FOXO3O43524 673 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 NLRP12P59046 1061 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 PPHLN1Q8NEY8 458 aaKnown RBP15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 SERPINI1Q99574 410 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 TSC22D3Q99576 134 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 BEGAINQ9BUH8 593 aa15.93■□□□□ 0.14
SPTLC2-201ENST00000216484 MRPS15P82914 257 aaKnown RBP15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 OCRLQ01968 901 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 DEUP1Q05D60 604 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 MEIS3Q99687 375 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 TRAIPQ9BWF2 469 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 SLC52A1Q9NWF4 448 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 NBNO60934 754 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 FAM47CQ5HY64 1035 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 TJAP1Q5JTD0 557 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 CPXCR1Q8N123 301 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 MAML1Q92585 1016 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 SKIP12755 728 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 TRIM8Q9BZR9 551 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 CBX8Q9HC52 389 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 B4E1Z4 1266 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 TOM1L1O75674 476 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 PIK3CAP42336 1068 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 TRAPPC10P48553 1259 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 ZNF280CQ8ND82 737 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 TSC1Q92574 1164 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 SPZ1Q9BXG8 430 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 MBIPQ9NS73 344 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 ENOX1Q8TC92 643 aaKnown RBP15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 ALKBH8Q96BT7 664 aaKnown RBP15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 PACSIN2Q9UNF0 486 aaPredicted RBP15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 CFLARO15519 480 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 GRAMD1BQ3KR37 738 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 ZC3H18Q86VM9 953 aaKnown RBP15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 MLKLQ8NB16 471 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 XAGE3Q8WTP9 111 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 PASKQ96RG2 1323 aa15.92■□□□□ 0.14
SPTLC2-201ENST00000216484 KRT8P05787 483 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 ABHD8Q96I13 439 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 ZFYVE19Q96K21 471 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 NME9Q86XW9 330 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 WARS2Q9UGM6 360 aaKnown RBP15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 POLR2BP30876 1174 aaKnown RBP15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 ADCY1Q08828 1119 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 CPP00450 1065 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 TTC38Q5R3I4 469 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 SNX21Q969T3 373 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 UPF3AQ9H1J1 476 aaKnown RBP15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 E2F6O75461 281 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 DNAAF3Q8N9W5 541 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 BLZF1Q9H2G9 400 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 DLATP10515 647 aaKnown RBP15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 YWHAHQ04917 246 aaPredicted RBP15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 PA2G4Q9UQ80 394 aaKnown RBP15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 NCLNQ969V3 563 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 OTULINQ96BN8 352 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 HACD3Q9P035 362 aa15.91■□□□□ 0.14
SPTLC2-201ENST00000216484 KRT14P02533 472 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 TBK1Q9UHD2 729 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 TNNC2P02585 160 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 PMLP29590 882 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 GDAP1Q8TB36 358 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 NFE2L3Q9Y4A8 694 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 PARP3Q9Y6F1 533 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 KDM1AO60341 852 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 SORBS3O60504 671 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 GLT8D2Q9H1C3 349 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 C1orf112Q9NSG2 853 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 CPSF3Q9UKF6 684 aaKnown RBP15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 SATB2Q9UPW6 733 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 CUTAO60888 179 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 CCDC92Q53HC0 331 aaPredicted RBP15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 NAA35Q5VZE5 725 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 DYDC2Q96IM9 177 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 LIG4P49917 911 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 DEPTORQ8TB45 409 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 FGFR1OP2Q9NVK5 253 aa15.9■□□□□ 0.14
SPTLC2-201ENST00000216484 CFTRP13569 1480 aa15.89■□□□□ 0.14
SPTLC2-201ENST00000216484 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.14
SPTLC2-201ENST00000216484 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 COPS6Q7L5N1 327 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 GLG1Q92896 1179 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 POTEB3A0JP26 581 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms