RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 GTF3C6Q969F1 213 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 NCOA5Q9HCD5 579 aaKnown RBP23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 TXNRD2Q9NNW7 524 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 BTBD7Q9P203 1132 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 GPR25O00155 361 aa23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 ZBTB5O15062 677 aa23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 ICAM1P05362 532 aa23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 STAT3P40763 770 aa23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 SP3Q02447 781 aa23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 SNRNP48Q6IEG0 339 aaKnown RBP23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 TRIM22Q8IYM9 498 aa23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 ZNF214Q9UL59 606 aaPredicted RBP23.39■■□□□ 1.33
RHBDD3-201ENST00000216085 SLC25A27O95847 323 aa23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 SCRN1Q12765 414 aa23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 CMTR1Q8N1G2 835 aaKnown RBP23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 REPS2Q8NFH8 660 aa23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 RAVER2Q9HCJ3 691 aaKnown RBP23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 FAM217BQ9NTX9 383 aaPredicted RBP23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 CCPG1Q9ULG6 757 aa23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 CNTNAP5Q8WYK1 1306 aa23.38■■□□□ 1.33
RHBDD3-201ENST00000216085 CYTH3O43739 400 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 CNMDO75829 334 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 HSPA1AP0DMV8 641 aaKnown RBP23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 HSPA1BP0DMV9 641 aaKnown RBP23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 IFNAR1P17181 557 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 ARHGEF6Q15052 776 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 NBPF11Q86T75 865 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 RIOX2Q8IUF8 465 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 MTMR8Q96EF0 704 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 PIGSQ96S52 555 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 R3HDMLQ9H3Y0 253 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 PNMA6FA0A0J9YX94 578 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 MAPK4P31152 587 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 SNAP25P60880 206 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 QRICH1Q2TAL8 776 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 TKFCQ3LXA3 575 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 FBXO11Q86XK2 927 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 SHCBP1Q8NEM2 672 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 AMNQ9BXJ7 453 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 MROH8Q9H579 483 aa23.37■■□□□ 1.33
RHBDD3-201ENST00000216085 COL11A1P12107 1806 aaPredicted RBP23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 FKTNO75072 461 aa23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 SLC4A3P48751 1232 aa23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 PIBF1Q8WXW3 757 aa23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 ERO1AQ96HE7 468 aa23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 MOV10L1Q9BXT6 1211 aaKnown RBP23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 RNF26Q9BY78 433 aaPredicted RBP23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 TSKSQ9UJT2 592 aa23.36■■□□□ 1.33
RHBDD3-201ENST00000216085 LARGE1O95461 756 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 CTCFP49711 727 aaPredicted RBP23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 WDR78Q5VTH9 848 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 NCAPG2Q86XI2 1143 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 HSCBQ8IWL3 235 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 FBXO40Q9UH90 709 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 FCGRTP55899 365 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 LACTBP83111 547 aaPredicted RBP23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 SSRP1Q08945 709 aaKnown RBP23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 POTEEQ6S8J3 1075 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 NECAB1Q8N987 351 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 IVNS1ABPQ9Y6Y0 642 aa23.35■■□□□ 1.33
RHBDD3-201ENST00000216085 ZNF536O15090 1300 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 ALAS1P13196 640 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 NTRK3Q16288 839 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 Q3C1V9 767 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 USH1GQ495M9 461 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 CHST13Q8NET6 341 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 SNX21Q969T3 373 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 AGBL1Q96MI9 1066 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 SLC26A6Q9BXS9 759 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 V9GY48 417 aaPredicted RBP23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 ABCB11O95342 1321 aa23.34■■□□□ 1.33
RHBDD3-201ENST00000216085 hCG_1984214I3L0E3 225 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 PEX10O60683 326 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 CD2BP2O95400 341 aaKnown RBP23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 ERCC3P19447 782 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 FUT2Q10981 343 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 SLC35G1Q2M3R5 365 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 CCDC83Q8IWF9 413 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 ZNF713Q8N859 430 aaPredicted RBP23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 ZNF296Q8WUU4 475 aaPredicted RBP23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 PHKBQ93100 1093 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 TMX3Q96JJ7 454 aa23.33■■□□□ 1.33
RHBDD3-201ENST00000216085 BAZ2BQ9UIF8 2168 aaKnown RBP23.33■■□□□ 1.32
RHBDD3-201ENST00000216085 FOXN1O15353 648 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 PRPF3O43395 683 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 LLPHQ9BRT6 129 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 ACAD9Q9H845 621 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 HOMER2Q9NSB8 354 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 RNF146Q9NTX7 359 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 MRPL11Q9Y3B7 192 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 PCDHA1Q9Y5I3 950 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 MYH6P13533 1939 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 TNPO2O14787 897 aaKnown RBP23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 FMNL1O95466 1100 aaPredicted RBP23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 COA7Q96BR5 231 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 TRERF1Q96PN7 1200 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 PORCNQ9H237 461 aa23.32■■□□□ 1.32
RHBDD3-201ENST00000216085 K7ELQ4 463 aaPredicted RBP23.31■■□□□ 1.32
RHBDD3-201ENST00000216085 DEXIO95424 95 aa23.31■■□□□ 1.32
RHBDD3-201ENST00000216085 HEATR3Q7Z4Q2 680 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms