RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Agr3Q8R3W7 165 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Sf3b3Q921M3 1217 aaKnown RBP18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Tmed2Q9R0Q3 201 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Aldh18a1Q9Z110 795 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Angpt1O08538 498 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Tom1l2Q5SRX1 507 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Naa35Q6PHQ8 725 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Ccdc159Q8C963 411 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Efcab5A0JP43 1406 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Gm4871D3Z0W7 314 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Gm10639E9Q6L7 222 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Gsta2P10648 222 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Thumpd3P97770 505 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Satb2Q8VI24 733 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Hdac6Q9Z2V5 1149 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Gm10563F6WIE4 79 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Gm7995L7N2E4 160 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Gm28047Q3US59 414 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Actn3O88990 900 aaKnown RBP18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Mrps27Q8BK72 415 aaKnown RBP18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 WdpcpQ8C456 722 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Zfp94E9Q6Y4 486 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Prdm1Q60636 856 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Tex2Q6ZPJ0 1128 aaKnown RBP18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Caps2Q8BUG5 550 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Zfp202Q8C879 641 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Rdm1Q9CQK3 281 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Psma7Q9Z2U0 248 aa18.04■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Rabgef1Q9JM13 491 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Actn1Q7TPR4 892 aaKnown RBP18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 A630010A05RikA9C473 232 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Efcab14Q8BGQ6 484 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Oxr1Q4KMM3 866 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 HomezQ80W88 542 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 ScgnQ91WD9 276 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Rpn1Q91YQ5 608 aaKnown RBP18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 FanclQ9CR14 375 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Wars2Q9CYK1 360 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Atf7ipQ7TT18 1306 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Cnbd1B1AWM0 430 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 PparaP23204 468 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Rasgrf1P27671 1262 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Alox15P39654 663 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Pomgnt2Q8BW41 605 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Myef2Q8C854 591 aaKnown RBP18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Echdc1Q9D9V3 322 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Trim5E9PV98 497 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Myl10Q62082 202 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Pou5f1P20263 352 aaKnown RBP18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Ftl2P49945 183 aa18.03■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Olfr310B2RVZ1 332 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Serpina3iD3Z450 408 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Pa2g4P50580 394 aaKnown RBP18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Nfe2l2Q60795 597 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Stx3Q64704 289 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 CcnyQ8BGU5 341 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 4933409G03RikQ8C5U0 320 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 LmnaP48678 665 aaKnown RBP18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 ScinQ60604 715 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Tdrd7Q8K1H1 1086 aaKnown RBP18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Erap1Q9EQH2 930 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Ptk2bQ9QVP9 1009 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Mast3Q3U214 1321 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Olfm5Q8BU90 496 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 HpdP49429 393 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Tubgcp3P58854 905 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Ano4Q8C5H1 955 aa18.02■□□□□ 0.48
Ubr3-202ENSMUST00000112251 Kbtbd3Q8BHI4 607 aa18.02■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Rbm17Q8JZX4 405 aaKnown RBP18.02■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Map3k12Q60700 888 aa18.02■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Dnajc6Q80TZ3 938 aa18.02■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Ddah1Q9CWS0 285 aa18.02■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Mtrf1Q8K126 446 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Tmem60Q8K174 133 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Itgb1bp2Q9R000 350 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Myl1P05977 188 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Kctd6Q8BNL5 237 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Tspan17Q9D7W4 270 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Gdpd2Q9ESM6 539 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Gm20911A0A087WSS0 222 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Plekhg4A0A1L1SU27 1217 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 CalcaP70160 136 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Phf21aQ6ZPK0 659 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 HdlbpQ8VDJ3 1268 aaKnown RBP18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Wdr91Q7TMQ7 748 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 MlklQ9D2Y4 472 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 EhhadhQ9DBM2 718 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Spire2Q8K1S6 718 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Mdm2P23804 489 aa18.01■□□□□ 0.47
Ubr3-202ENSMUST00000112251 EmbP21995 330 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Gm10488Q4KL05 212 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Serpinb10Q8K1K6 397 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Ing3Q8VEK6 421 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Pds5bQ4VA53 1446 aaKnown RBP18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Lmbrd2Q8C561 694 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 E2f6O54917 272 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Tlk2O55047 718 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Spag7Q7TNE3 227 aaKnown RBP18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 Strip2Q8C9H6 844 aa18■□□□□ 0.47
Ubr3-202ENSMUST00000112251 GlyctkQ8QZY2 523 aa18■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms