RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Abca8bQ8K440 1620 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Prl7a2O54831 253 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 InsrrQ9WTL4 1300 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Actn3O88990 900 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Patl1Q3TC46 770 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Sh3gl3Q62421 347 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Sp4Q62445 782 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 MtbpQ8BJS8 894 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Cfap70D3YVL2 1141 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Zscan22Q8BGS5 496 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Cdc23Q8BGZ4 597 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Scyl2Q8CFE4 930 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Rgs3Q9DC04 966 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Nlrp4cQ3TKR3 982 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Map3k7Q62073 579 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Nlrp14Q6B966 993 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Nrbp2Q91V36 499 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ttc1Q91Z38 292 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Mrps25Q9D125 171 aaKnown RBP18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Parp14Q2EMV9 1817 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Prdm11A2AGX3 565 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gm7995L7N2E4 160 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 PodnQ7TQ62 611 aa18.06■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Bin2D3Z6Q9 489 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Rab20P35295 233 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Tmed8Q3UHI4 326 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Nxf1Q99JX7 618 aaKnown RBP18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Znf652Q5DU09 608 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Dbn1Q9QXS6 706 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Krt26Q3TRJ4 462 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 NkapQ9D0F4 415 aaKnown RBP18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ice2Q3UZ18 988 aaKnown RBP18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 DeptorQ570Y9 409 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Zfyve19Q9DAZ9 389 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Mlh1Q9JK91 760 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 P2rx5Q3UYI1 455 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Arhgap29Q8CGF1 1266 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ccdc65Q8VHI7 493 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Dr1Q91WV0 176 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Wdr46Q9Z0H1 622 aaKnown RBP18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Plch2A2AP18 1501 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Hfm1D3Z4R1 1434 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Prdm1Q60636 856 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Tpd52Q62393 224 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Atg16l1Q8C0J2 607 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Lmtk2Q3TYD6 1471 aa18.05■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Rasgrf2P70392 1189 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 E330017A01RikQ8BU47 192 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Mettl24Q8CCB5 363 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Lamc1P02468 1607 aaKnown RBP18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gucy1b3O54865 620 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Vti1aO89116 217 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 PicalmQ7M6Y3 660 aaKnown RBP18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ppp2r5aQ6PD03 486 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Dph5Q9CWQ0 281 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 MesdQ9ERE7 224 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Tmem132eQ6IEE6 982 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 1700020D05RikQ99PB1 294 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 DexiQ9WUQ7 95 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Cfap221A9Q751 836 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Zc4h2Q68FG0 224 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Impg2Q80XH2 1243 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Sept2P42208 361 aaKnown RBP18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Acad11Q80XL6 779 aa18.04■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Znf335A2A5K6 1337 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Prdm2A2A7B5 1709 aaKnown RBP18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 AdkP55264 361 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Cyp24a1Q64441 514 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Bag5Q8CI32 447 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Dnajb7Q9QYI8 312 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gngt2Q61017 69 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Bola2Q8BGS2 86 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ccdc169Q8BXX9 214 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ppp2r3dQ9Z176 491 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 VrtnQ3SYK4 740 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 P3h4Q8K2B0 443 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Tom1l1Q923U0 474 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gm6657A0A1B0GRJ3 277 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 SelenovD3YXG1 328 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gbp4A4UUI3 631 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Tas2r124Q7M718 309 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Myh11O08638 1972 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 A0A1W2P6Q8 802 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gm9048A0A1W2P7H4 802 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 A0A1W2P7Z8 802 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Gm9046A0A1W2P855 802 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Sgsm2Q80U12 1005 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Mrpl40Q9Z2Q5 206 aa18.03■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ppp2r5cQ60996 524 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 E4f1Q8CCE9 783 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ric8aQ3TIR3 530 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Eme2Q56A04 373 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Ecel1Q9JMI0 775 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 H2afzP0C0S6 128 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Slc3a2P10852 526 aaKnown RBP18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 H2afvQ3THW5 128 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Krt4P07744 525 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Igflr1Q3U4N7 345 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Pank2Q3U4S0 443 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 PapolaQ61183 739 aa18.02■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms