RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Znf697Q569E7 569 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Znf652Q5DU09 608 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 PodnQ7TQ62 611 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 WaslQ91YD9 501 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ndufab1Q9CR21 156 aa11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Noc2lQ9WV70 747 aaKnown RBP11.35□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Fkbp1aP26883 108 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Brinp3Q499E0 766 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Atg9aQ68FE2 551 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Appl2Q8K3G9 662 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Amhr2Q8K592 568 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Snrnp35Q9D384 244 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Pdzd4Q9QY39 772 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Trpc3Q9QZC1 836 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Eftud2O08810 971 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Cbfa2t2O70374 594 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ftl1P29391 183 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 NeblQ0II04 452 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Fam83bQ0VBM2 1012 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Gm5168Q4KL04 211 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Klhl7Q8BUL5 586 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Alpk1Q9CXB8 1231 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Speer2E9Q9U2 264 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 YwhaeP62259 255 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Traf5P70191 558 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Mier3Q3UHF3 551 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ccdc125Q5U465 500 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 HelbQ6NVF4 1074 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Mcur1Q9CXD6 340 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Mxra7Q9CZH7 178 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 AacsQ9D2R0 672 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Nop56Q9D6Z1 580 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 RabggtaQ9JHK4 567 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Hic2Q9JLZ6 619 aaKnown RBP11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 GdaQ9R111 454 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Ccne2Q9Z238 404 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 ChkbO55229 394 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 H2afzP0C0S6 128 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Akr1b8P45377 316 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 H2afvQ3THW5 128 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 TrhQ62361 256 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Epn1Q80VP1 575 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 Efcab8Q8C9R9 203 aa11.34□□□□□ -0.59
Ccdc40-201ENSMUST00000035935 VimP20152 466 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Adssl1P28650 457 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ttll12Q3UDE2 639 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Rasa3Q60790 834 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Il17raQ60943 864 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mpp4Q6P7F1 635 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sestd1Q80UK0 696 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 HhatQ8BMT9 499 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Fam204aQ8C6C7 236 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Myef2Q8C854 591 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ltb4r2Q9JJL9 360 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Zfp804bA0A0G2JGH6 1343 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gm14525B1AZA0 212 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gm2012B1B0R1 212 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Vmn2r23E9PXI5 849 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 XpcP51612 930 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pcif1P59114 706 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mybpc2Q5XKE0 1136 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gm14819Q62478 212 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 LRWD1Q8BUI3 648 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Vps52Q8C754 723 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pfkfb3A7UAK5 555 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cyp2c23E9Q5K4 494 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Zfp597E9Q6S0 419 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Diaph2O70566 1098 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cyp2d11P24457 504 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Slc12a2P55012 1205 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Myo1fP70248 1099 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 AcrbpQ3V140 540 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Cyp7b1Q60991 507 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Q6PD19 689 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Zmynd15Q8C0R7 736 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Apopt1Q9CQW7 192 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Acsl3Q9CZW4 720 aaKnown RBP11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Dusp10Q9ESS0 483 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sox5P35710 763 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Map3k9Q3U1V8 1077 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Nek5Q7TSC3 627 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Ccdc186Q8C9S4 917 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Slc18a1Q8R090 521 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Atad3Q925I1 591 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pstpip2Q99M15 334 aa11.33□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 AW822073A0A0N4SUK1 652 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Gm5580A0A0N4SVP8 411 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Surf1P09925 306 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Tom1l2Q5SRX1 507 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Mei4Q8BRM6 389 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 C130026I21RikQ8C898 291 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Fbxo18Q8K2I9 1042 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Galnt15Q9D2N8 638 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Otud7bB2RUR8 840 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pgrmc1O55022 195 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sema3eP70275 775 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 C87499Q3UX49 493 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Pnma5Q5DTT8 618 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Zbtb7bQ64321 544 aa11.32□□□□□ -0.6
Ccdc40-201ENSMUST00000035935 Sap130Q8BIH0 1057 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms