RNA–Protein interactions for RNA: ENST00000639880.1

HNRNPU-222, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,239 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-222ENST00000639880 TLDC2A0PJX2 215 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 SMIM23A6NLE4 172 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 COL9A3Q14050 684 aaPredicted RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 LONRF2Q1L5Z9 754 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 NEK8Q86SG6 692 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 KCNB2Q92953 911 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 NOX5Q96PH1 765 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 LMTK3Q96Q04 1460 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 USP17L3A6NCW0 530 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 USP17L4A6NCW7 530 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 TOM1O60784 492 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 MAP2K1Q02750 393 aaPredicted RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 ZSCAN26Q16670 478 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 USH1GQ495M9 461 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 NCAPH2Q6IBW4 605 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 USP17L1Q7RTZ2 530 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GDAQ9Y2T3 454 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GOLGA6CA6NDK9 693 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 TEX33O43247 280 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 PRPF3O43395 683 aaKnown RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GOLGA6DP0CG33 693 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 CYP2D6P10635 497 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 PRDX5P30044 214 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 CCZ1BP86790 482 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 CCZ1P86791 482 aaPredicted RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 MECOMQ03112 1051 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 WHAMMP3Q1A5X7 153 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 E4F1Q66K89 784 aaPredicted RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 MICALCLQ6ZW33 695 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 METTL16Q86W50 562 aaKnown RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 KLHL7Q8IXQ5 586 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 ENAHQ8N8S7 591 aaPredicted RBP9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 STAG1Q8WVM7 1258 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 LZTS2Q9BRK4 669 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 EHMT1Q9H9B1 1298 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GOLGA6AQ9NYA3 693 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
HNRNPU-222ENST00000639880 GOLGA6L10A0A0M3HER8 536 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 BUB1O43683 1085 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 HPDP32754 393 aaPredicted RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 MNAT1P51948 309 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 TICAM2Q86XR7 235 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 CPVLQ9H3G5 476 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 DDX41Q9UJV9 622 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 UBE2Q2LH0YL09 131 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 PNMA6AP0CW24 399 aaPredicted RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 CYP19A1P11511 503 aaPredicted RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 BTDP43251 543 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 KLHL30Q0D2K2 578 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 TRIM28Q13263 835 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 USP49Q70CQ1 688 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 RBM17Q96I25 401 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 ANKRD62A6NC57 917 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 TNNC1P63316 161 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 CYP27A1Q02318 531 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 CUL4BQ13620 913 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 KRT31Q15323 416 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 MAEAQ7L5Y9 396 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 ENGASEQ8NFI3 743 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 CNOT6LQ96LI5 555 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 IRX2Q9BZI1 471 aaPredicted RBP9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 TRIM31Q9BZY9 425 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 TAOK3Q9H2K8 898 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 VEZTQ9HBM0 779 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 PCDHA12Q9UN75 941 aa9.34□□□□□ -0.91
HNRNPU-222ENST00000639880 AGLP35573 1532 aa9.34□□□□□ -0.92
HNRNPU-222ENST00000639880 POTEJP0CG39 1038 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 RPL13P26373 211 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 CETN2P41208 172 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 CCDC174Q6PII3 467 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 LMBR1Q8WVP7 490 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 PCDHA4Q9UN74 947 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 PCP11498 1178 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 TRAPPC10P48553 1259 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 GYS2P54840 703 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 MTF1Q14872 753 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 LRRC41Q15345 812 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 SGMS1Q86VZ5 419 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 SRP68Q9UHB9 627 aaKnown RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 DIP2BQ9P265 1576 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 CEP104O60308 925 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 SCNN1DP51172 638 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 IGDCC4Q8TDY8 1250 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 UBLCP1Q8WVY7 318 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 GPR101Q96P66 508 aaPredicted RBP9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
HNRNPU-222ENST00000639880 TRIM49BA6NDI0 452 aa9.32□□□□□ -0.92
HNRNPU-222ENST00000639880 ASIC2Q16515 512 aa9.32□□□□□ -0.92
HNRNPU-222ENST00000639880 SFMBT2Q5VUG0 894 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms