RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	PANX2	Q96RD6	677 aa		11.31	□□□□□ -0.6
SPIN3-222	ENST00000639482	CEP131	Q9UPN4	1083 aa		11.31	□□□□□ -0.6
SPIN3-222	ENST00000639482	SRPRB	Q9Y5M8	271 aa	Known RBP	11.31	□□□□□ -0.6
SPIN3-222	ENST00000639482	DDX60	Q8IY21	1712 aa	Known RBP	11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	E2F4	Q16254	413 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	RASGRP4	Q8TDF6	673 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	NELFB	Q8WX92	580 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	CRACR2A	Q9BSW2	395 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	NACAP1	Q9BZK3	213 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	TSPYL1	Q9H0U9	437 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	BSDC1	Q9NW68	430 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	PATL2	C9JE40	543 aa	Known RBP	11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	CAVIN4	Q5BKX8	364 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	MMS19	Q96T76	1030 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	UBXN6	Q9BZV1	441 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	EHD4	Q9H223	541 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	ABHD10	Q9NUJ1	306 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	TNKS	O95271	1327 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	MAP2K7	O14733	419 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	NMT2	O60551	498 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	ATP1A1	P05023	1023 aa	Known RBP	11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	CYP2D6	P10635	497 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	XBP1	P17861	261 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	PPARA	Q07869	468 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	SF3B3	Q15393	1217 aa	Known RBP	11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	MUM1L1	Q5H9M0	696 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	KANK3	Q6NY19	840 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	MICALL1	Q8N3F8	863 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	DUSP10	Q9Y6W6	482 aa		11.3	□□□□□ -0.6
SPIN3-222	ENST00000639482	CNTNAP4	Q9C0A0	1308 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	EIF3CL	B5ME19	914 aa	Known RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	KCNJ18	B7U540	433 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	SARS	P49591	514 aa	Known RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	KCNJ12	Q14500	433 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	DIXDC1	Q155Q3	683 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	EIF3C	Q99613	913 aa	Known RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	SMARCAL1	Q9NZC9	954 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	TTF2	Q9UNY4	1162 aa	Known RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	ERCC5	P28715	1186 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	TM4SF1	P30408	202 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	CXCR5	P32302	372 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	COPB1	P53618	953 aa	Known RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	FAM170A	A1A519	330 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	PP2D1	A8MPX8	630 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	VEGFA	P15692	232 aa	Predicted RBP	11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	KRT2	P35908	639 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	NLRP5	P59047	1200 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	MSL1	Q68DK7	614 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	CYP26C1	Q6V0L0	522 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	FBXL16	Q8N461	479 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	KRT23	Q9C075	422 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	ACBD3	Q9H3P7	528 aa		11.29	□□□□□ -0.6
SPIN3-222	ENST00000639482	BTAF1	O14981	1849 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	MAGEB6P1	A0A0J9YX57	407 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	IPO7	O95373	1038 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	TRIM21	P19474	475 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	LIG3	P49916	1009 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	GTF2A1	P52655	376 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	NAP1L1	P55209	391 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	C2orf54	Q08AI8	447 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	ENOX2	Q16206	610 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	RASGRP2	Q7LDG7	609 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	TMTC1	Q8IUR5	882 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	ANKRD13C	Q8N6S4	541 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	CNBD1	Q8NA66	436 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	AFAP1L1	Q8TED9	768 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	IPO4	Q8TEX9	1081 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	TRIM47	Q96LD4	638 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	CTAGE1	Q96RT6	745 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	FOXP1	Q9H334	677 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	CCDC196	A0A1B0GTZ2	297 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	TTC26	A0AVF1	554 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	PPP1R3G	B7ZBB8	358 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	KLK7	P49862	253 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	SLC7A5	Q01650	507 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	MECOM	Q03112	1051 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	PAK1	Q13153	545 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	TTC31	Q49AM3	519 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	FAM47A	Q5JRC9	791 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	TTC38	Q5R3I4	469 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	APTX	Q7Z2E3	356 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	SGMS1	Q86VZ5	419 aa		11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	DHX37	Q8IY37	1157 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	LUC7L2	Q9Y383	392 aa	Known RBP	11.28	□□□□□ -0.6
SPIN3-222	ENST00000639482	POTEB2	H3BUK9	544 aa		11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	IVL	P07476	585 aa		11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	CCT5	P48643	541 aa		11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	IFIT1B	Q5T764	474 aa	Known RBP	11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	LRRC31	Q6UY01	552 aa		11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	GPATCH11	Q8N954	259 aa		11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	GBP3	Q9H0R5	595 aa		11.27	□□□□□ -0.6
SPIN3-222	ENST00000639482	NDUFA10	O95299	355 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	HIBADH	P31937	336 aa	Known RBP	11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	GGCX	P38435	758 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	LIFR	P42702	1097 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms