RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TTC38Q5R3I4 469 aa18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 TRMT10CQ7L0Y3 403 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 LRRC47Q8N1G4 583 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 NOX5Q96PH1 765 aa18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 CCDC68Q9H2F9 335 aa18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 CSADQ9Y600 493 aa18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 DEPTORQ8TB45 409 aa18.68■□□□□ 0.58
CACNA1A-253ENST00000637927 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 VAMP4O75379 141 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 DYNLT1P63172 113 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 HERC4Q5GLZ8 1057 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 KIAA1841Q6NSI8 718 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 SUCLG2Q96I99 432 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 MYBP10242 640 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 VCPP55072 806 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 LONRF2Q1L5Z9 754 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 DENND2CQ68D51 928 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 EDC3Q96F86 508 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 GSTA4O15217 222 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 MARK3P27448 753 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 IQCB1Q15051 598 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 GOLGA8HP0CJ92 632 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 TMOD1P28289 359 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 SPATA5Q8NB90 893 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 U2AF1L4Q8WU68 220 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 SNX1Q13596 522 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 BRAPQ7Z569 592 aa18.67■□□□□ 0.58
CACNA1A-253ENST00000637927 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 CCDC85BQ15834 202 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 MUM1Q2TAK8 710 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 HVCN1Q96D96 273 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 RPS6KC1Q96S38 1066 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 SUCLA2Q9P2R7 463 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 DDX41Q9UJV9 622 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 DEXIO95424 95 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 TRPA1O75762 1119 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 STMN1P16949 149 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 ATP2A3Q93084 1043 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 LSM14BQ9BX40 385 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 NFKBIL1Q9UBC1 381 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 ZRANB2O95218 330 aaKnown RBP eCLIP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 DPH5Q9H2P9 285 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 KCNH3Q9ULD8 1083 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 DNM3Q9UQ16 869 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 PNOCQ13519 176 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 FAM182BQ5T319 152 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 PLBD2Q8NHP8 589 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 AFAP1L1Q8TED9 768 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 NELFBQ8WX92 580 aa18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 FAM207AQ9NSI2 230 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-253ENST00000637927 FLT4P35916 1363 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 KCNA1Q09470 495 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 BAIAP2L1Q9UHR4 511 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 SYCP2Q9BX26 1530 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 ATP5DP30049 168 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 SDR42E1Q8WUS8 393 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 ZFYVE19Q96K21 471 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 DLGAP5Q15398 846 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 ANO1Q5XXA6 986 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 DPP9Q86TI2 863 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 CABP7Q86V35 215 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 PPHLN1Q8NEY8 458 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 TTF2Q9UNY4 1162 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 DBN1Q16643 649 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 VCXQ9H320 206 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 PLCD1P51178 756 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 PAK1Q13153 545 aa18.65■□□□□ 0.58
CACNA1A-253ENST00000637927 ZNF18P17022 549 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 PTPN21Q16825 1174 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 C8orf34Q49A92 452 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 LMNTD2Q8IXW0 634 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 LRGUKQ96M69 825 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 USP26Q9BXU7 913 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 FTOQ9C0B1 505 aaKnown RBP eCLIP18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 FBXL5Q9UKA1 691 aa18.64■□□□□ 0.58
CACNA1A-253ENST00000637927 LRRIQ4A6NIV6 560 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 H7C1D1 291 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 JAK2O60674 1132 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 PDCD6IPQ8WUM4 868 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 DAAM1Q9Y4D1 1078 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 TECP42680 631 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 ZSCAN32Q9NX65 697 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 POC1B-GALNT4F8VUJ3 575 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 SYF2O95926 243 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 PIK3CAP42336 1068 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 LIG4P49917 911 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 C7orf31Q8N865 590 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 ATP1A2P50993 1020 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 EVCP57679 992 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms