RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 CCNT1O60563 726 aaKnown RBP6.22□□□□□ -1.41
CHD2-227ENST00000637572 LGR5O75473 907 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
CHD2-227ENST00000637572 MTIF2P46199 727 aaKnown RBP6.22□□□□□ -1.41
CHD2-227ENST00000637572 ZSCAN23Q3MJ62 389 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 CCDC40Q4G0X9 1142 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 UBA5Q9GZZ9 404 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 PNMA3Q9UL41 463 aa6.22□□□□□ -1.41
CHD2-227ENST00000637572 SETD1AO15047 1707 aaKnown RBP6.21□□□□□ -1.41
CHD2-227ENST00000637572 A0A0G2JLW4 131 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 PPFIA3O75145 1194 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 FAM13AO94988 1023 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 FGFR2P21802 821 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 ADD1P35611 737 aaKnown RBP6.21□□□□□ -1.41
CHD2-227ENST00000637572 GPS2Q13227 327 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 ORC2Q13416 577 aaPredicted RBP6.21□□□□□ -1.41
CHD2-227ENST00000637572 CALCRLQ16602 461 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 ADCK5Q3MIX3 580 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 NOM1Q5C9Z4 860 aaKnown RBP6.21□□□□□ -1.41
CHD2-227ENST00000637572 ADALQ6DHV7 355 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 PPP1R18Q6NYC8 613 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 NEK8Q86SG6 692 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 SH3RF3Q8TEJ3 882 aaPredicted RBP6.21□□□□□ -1.41
CHD2-227ENST00000637572 LEO1Q8WVC0 666 aaPredicted RBP6.21□□□□□ -1.41
CHD2-227ENST00000637572 KAZALD1Q96I82 304 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 CDHR1Q96JP9 859 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 TRIM47Q96LD4 638 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 MYL10Q9BUA6 226 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 KCNH3Q9ULD8 1083 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 SALL1Q9NSC2 1324 aa6.21□□□□□ -1.41
CHD2-227ENST00000637572 TMEM232C9JQI7 657 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 POLRMTO00411 1230 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 ZSCAN12O43309 604 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 COPB2P35606 906 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 STAT2P52630 851 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 FKBP1AP62942 108 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 SCRN1Q12765 414 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 CNNM4Q6P4Q7 775 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 RSBN1LQ6PCB5 846 aaPredicted RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 CCDC174Q6PII3 467 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 C15orf52Q6ZUT6 534 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 CACNA2D4Q7Z3S7 1137 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 SGMS1Q86VZ5 419 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 FAM43AQ8N2R8 423 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 KIFC2Q96AC6 838 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 DHX58Q96C10 678 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 LRWD1Q9UFC0 647 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 VWA3AA6NCI4 1184 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 GSG1L2A8MUP6 293 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 JAK2O60674 1132 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 KRT13P13646 458 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 CHRNA5P30532 468 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 ZNF174Q15697 407 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 JAKMIP3Q5VZ66 844 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 FCHSD1Q86WN1 690 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 NSUN7Q8NE18 718 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 NEDD1Q8NHV4 660 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 CUEDC2Q9H467 287 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.21□□□□□ -1.426e-8■■■□□ 19.2
CHD2-227ENST00000637572 GOLGA6L9A6NEM1 432 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 SMAPO00193 183 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 FLOT1O75955 427 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 CFBP00751 764 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 SMTNP53814 917 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 ZYXQ15942 572 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 LRRC47Q8N1G4 583 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 DEPDC4Q8N2C3 294 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 MNS1Q8NEH6 495 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 AK8Q96MA6 479 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 ZNF277Q9NRM2 450 aaPredicted RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 VPS54Q9P1Q0 977 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 ADD3Q9UEY8 706 aaKnown RBP6.21□□□□□ -1.42
CHD2-227ENST00000637572 MTMR6Q9Y217 621 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 PCDHA1Q9Y5I3 950 aa6.21□□□□□ -1.42
CHD2-227ENST00000637572 GPR75-ASB3A0A0A6YYF3 556 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 BACH1O14867 736 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 CCT6AP40227 531 aaKnown RBP6.2□□□□□ -1.42
CHD2-227ENST00000637572 CTCFP49711 727 aaPredicted RBP6.2□□□□□ -1.42
CHD2-227ENST00000637572 KIF22Q14807 665 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 SPA17Q15506 151 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 C12orf60Q5U649 245 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 NSMFQ6X4W1 530 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 MLKLQ8NB16 471 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 IWS1Q96ST2 819 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 PANK2Q9BZ23 570 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 PCDHA4Q9UN74 947 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 DNM3Q9UQ16 869 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 DISP2A7MBM2 1401 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 A0A1W2PQ27 194 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 A0A1W2PQ64 194 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 A0A1W2PQD8 194 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 DPEP1P16444 411 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 LONP1P36776 959 aaKnown RBP6.2□□□□□ -1.42
CHD2-227ENST00000637572 MB21D2Q8IYB1 491 aaPredicted RBP6.2□□□□□ -1.42
CHD2-227ENST00000637572 CPXCR1Q8N123 301 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 MAP3K14Q99558 947 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 ARGLU1Q9NWB6 273 aaPredicted RBP6.2□□□□□ -1.42
CHD2-227ENST00000637572 FBXO40Q9UH90 709 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 EXOC7Q9UPT5 735 aa6.2□□□□□ -1.42
CHD2-227ENST00000637572 LTN1O94822 1766 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms