RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 COL2A1P02458 1487 aaPredicted RBP24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 WNT10BO00744 389 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 MCM7P33993 719 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 RBM26Q5T8P6 1007 aaKnown RBP24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 LUZP1Q86V48 1076 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 PPP1R9BQ96SB3 815 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 CSRNP2Q9H175 543 aa24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.79■■□□□ 1.56
CHRNA7-228ENST00000637519 C11orf57Q6ZUT1 292 aaPredicted RBP24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 TMEM179Q6ZVK1 233 aa24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 FAM151AQ8WW52 585 aa24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 COA7Q96BR5 231 aa24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 KANSL2Q9H9L4 492 aa24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 SRPRBQ9Y5M8 271 aaKnown RBP24.78■■□□□ 1.56
CHRNA7-228ENST00000637519 ADGRF4Q8IZF3 695 aa24.77■■□□□ 1.56
CHRNA7-228ENST00000637519 FAM200AQ8TCP9 573 aa24.77■■□□□ 1.56
CHRNA7-228ENST00000637519 JMJD4Q9H9V9 463 aa24.77■■□□□ 1.56
CHRNA7-228ENST00000637519 MYOZ2Q9NPC6 264 aa24.77■■□□□ 1.56
CHRNA7-228ENST00000637519 CBX8Q9HC52 389 aa24.77■■□□□ 1.56
CHRNA7-228ENST00000637519 KCNH3Q9ULD8 1083 aa24.77■■□□□ 1.56
CHRNA7-228ENST00000637519 FAM237AA0A1B0GTK4 181 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 SMCO2A6NFE2 343 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 SMARCA1P28370 1054 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 PTGDRQ13258 359 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 MIGA2Q7L4E1 593 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 DAGLBQ8NCG7 672 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 ZBED3Q96IU2 234 aaPredicted RBP24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 NUP88Q99567 741 aaPredicted RBP24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 ZMYND12Q9H0C1 365 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 NYAP2Q9P242 653 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 CCDC194A0A1B0GVG4 234 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 PPP1R11O60927 126 aaPredicted RBP24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 INF2Q27J81 1249 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 LONRF3Q496Y0 759 aa24.76■■□□□ 1.55
CHRNA7-228ENST00000637519 USP17L10C9JJH3 530 aa24.75■■□□□ 1.55
CHRNA7-228ENST00000637519 AP5Z1O43299 807 aa24.75■■□□□ 1.55
CHRNA7-228ENST00000637519 PLCB2Q00722 1185 aa24.75■■□□□ 1.55
CHRNA7-228ENST00000637519 SLFN13Q68D06 897 aa24.75■■□□□ 1.55
CHRNA7-228ENST00000637519 MTMR14Q8NCE2 650 aa24.75■■□□□ 1.55
CHRNA7-228ENST00000637519 GJA3Q9Y6H8 435 aa24.75■■□□□ 1.55
CHRNA7-228ENST00000637519 BIN1O00499 593 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 PDILTQ8N807 584 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 PDLIM2Q96JY6 352 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 ASTN2O75129 1339 aaPredicted RBP24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 FOXN1O15353 648 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 SLC1A4P43007 532 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 MKL1Q969V6 931 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 EPSTI1Q96J88 318 aa24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 HERC5Q9UII4 1024 aaKnown RBP24.74■■□□□ 1.55
CHRNA7-228ENST00000637519 A0A1W2PRG0 241 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 VWA3AA6NCI4 1184 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 ATP2C1P98194 919 aaPredicted RBP24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 UVSSAQ2YD98 709 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 GPATCH4Q5T3I0 446 aaKnown RBP24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 TMEM260Q9NX78 707 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 KIAA1468Q9P260 1216 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 POLR2DO15514 142 aaKnown RBP24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 MYO1BO43795 1136 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 TRAPPC10P48553 1259 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 ZNF165P49910 485 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 GMPSP49915 693 aaPredicted RBP24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 PNOCQ13519 176 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 TNIP1Q15025 636 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 STX1AQ16623 288 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 SAMD7Q7Z3H4 446 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 FAM13BQ9NYF5 915 aa24.73■■□□□ 1.55
CHRNA7-228ENST00000637519 A0A087X0B3 334 aa24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 ECE1P42892 770 aa24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 IL17AQ16552 155 aa24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 ISM2Q6H9L7 571 aa24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 GALNT17Q6IS24 598 aa24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 KRBA2Q6ZNG9 492 aa24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 ZNF579Q8NAF0 562 aaKnown RBP24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 CCDC12Q8WUD4 166 aaPredicted RBP24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 BIN2Q9UBW5 565 aaPredicted RBP24.72■■□□□ 1.55
CHRNA7-228ENST00000637519 F5H6K3 240 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 NDUFB10O96000 172 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 KLRC3Q07444 240 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 PPP4R3BQ5MIZ7 849 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 JAKMIP3Q5VZ66 844 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 MICALL2Q8IY33 904 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 SPICE1Q8N0Z3 855 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 C6orf50Q9HD87 102 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 ZNF541Q9H0D2 1346 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 SNAP25P60880 206 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 CNNM3Q8NE01 707 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 SYMPKQ92797 1274 aaKnown RBP24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 TIGD1Q96MW7 591 aa24.71■■□□□ 1.55
CHRNA7-228ENST00000637519 DPCR1Q3MIW9 517 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 TBC1D10BQ4KMP7 808 aaPredicted RBP24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 GRAMD1CQ8IYS0 662 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 SERTAD1Q9UHV2 236 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 LTBP3Q9NS15 1303 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 PNMA6FA0A0J9YX94 578 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 ADCY5O95622 1261 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 BMP15O95972 392 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 CCDC84Q86UT8 332 aaPredicted RBP24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 ACER1Q8TDN7 264 aa24.7■■□□□ 1.54
CHRNA7-228ENST00000637519 TRIM44Q96DX7 344 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms