RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 PNMA8AQ86V59 439 aaPredicted RBP17.66■□□□□ 0.42
CLN6-219ENST00000637329 SCYL3Q8IZE3 742 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 LEO1Q8WVC0 666 aaPredicted RBP17.66■□□□□ 0.42
CLN6-219ENST00000637329 SHISA4Q96DD7 197 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 SPATA32Q96LK8 384 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
CLN6-219ENST00000637329 PLA2G6O60733 806 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 YEATS4O95619 227 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 BMP3P12645 472 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 RILPL1Q5EBL4 403 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 HEATR3Q7Z4Q2 680 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 ADGRF4Q8IZF3 695 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 WRNIP1Q96S55 665 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 GPCPD1Q9NPB8 672 aa17.65■□□□□ 0.42
CLN6-219ENST00000637329 SCAF8Q9UPN6 1271 aaKnown RBP17.65■□□□□ 0.42
CLN6-219ENST00000637329 PNMA6FA0A0J9YX94 578 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 CCDC85CA6NKD9 419 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 BTBD18B2RXH4 712 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 ZBTB5O15062 677 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 NASPP49321 788 aaPredicted RBP17.64■□□□□ 0.41
CLN6-219ENST00000637329 NLRP5P59047 1200 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 NPY5RQ15761 445 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 KCTD1Q719H9 257 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 LPAR1Q92633 364 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 PIGSQ96S52 555 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 KIAA1683Q9H0B3 1180 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 TAF1DQ9H5J8 278 aaPredicted RBP17.64■□□□□ 0.41
CLN6-219ENST00000637329 JMJD4Q9H9V9 463 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 AS3MTQ9HBK9 375 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 PCDHA4Q9UN74 947 aa17.64■□□□□ 0.41
CLN6-219ENST00000637329 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
CLN6-219ENST00000637329 TCHHQ07283 1943 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 OTOFQ9HC10 1997 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 ECE1P42892 770 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 NAPAP54920 295 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 HOMER1Q86YM7 354 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 KCNG4Q8TDN1 519 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 ACER1Q8TDN7 264 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
CLN6-219ENST00000637329 TNFRSF25Q93038 417 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 FEZ1Q99689 392 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 UBA5Q9GZZ9 404 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 ZMYND12Q9H0C1 365 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 PICK1Q9NRD5 415 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 RCOR1Q9UKL0 485 aa17.63■□□□□ 0.41
CLN6-219ENST00000637329 MORC2Q9Y6X9 1032 aaPredicted RBP17.63■□□□□ 0.41
CLN6-219ENST00000637329 RAD21O60216 631 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 GNA11P29992 359 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 INPP5BP32019 993 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 STAT2P52630 851 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 USP14P54578 494 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 TRAF1Q13077 416 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 SYDE2Q5VT97 1194 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 KRT26Q7Z3Y9 468 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 FAM160B2Q86V87 743 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 BLIDQ8IZY5 108 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLN6-219ENST00000637329 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 CPVLQ9H3G5 476 aa17.62■□□□□ 0.41
CLN6-219ENST00000637329 ISY1Q9ULR0 285 aaKnown RBP17.62■□□□□ 0.41
CLN6-219ENST00000637329 NOL7Q9UMY1 257 aaKnown RBP17.62■□□□□ 0.41
CLN6-219ENST00000637329 WDR46O15213 610 aaKnown RBP17.61■□□□□ 0.41
CLN6-219ENST00000637329 NF2P35240 595 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 MAP2K1Q02750 393 aaPredicted RBP17.61■□□□□ 0.41
CLN6-219ENST00000637329 NR5A1Q13285 461 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 ANO1Q5XXA6 986 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 TTBK2Q6IQ55 1244 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 TYW1BQ6NUM6 668 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 OXER1Q8TDS5 423 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 GLT8D2Q9H1C3 349 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 C6orf50Q9HD87 102 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 WBP1LQ9NX94 342 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
CLN6-219ENST00000637329 PHIPQ8WWQ0 1821 aa17.61■□□□□ 0.41
CLN6-219ENST00000637329 TMEM88BA6NKF7 163 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 ADM5C9JUS6 153 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 PPP1R12BO60237 982 aaPredicted RBP17.6■□□□□ 0.41
CLN6-219ENST00000637329 BMP15O95972 392 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 VEGFBP49765 207 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 RGS19P49795 217 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 IKQ13123 557 aaPredicted RBP17.6■□□□□ 0.41
CLN6-219ENST00000637329 CDC37Q16543 378 aaPredicted RBP17.6■□□□□ 0.41
CLN6-219ENST00000637329 LINC00301Q8NCQ3 95 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 GPT2Q8TD30 523 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 CHURC1Q8WUH1 139 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
CLN6-219ENST00000637329 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.6■□□□□ 0.41
CLN6-219ENST00000637329 FEM1BQ9UK73 627 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 CEP131Q9UPN4 1083 aa17.6■□□□□ 0.41
CLN6-219ENST00000637329 GOLGA6L4A6NEF3 574 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms