RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 RAB11FIP4Q86YS3 637 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 PRPF38AQ8NAV1 312 aaKnown RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 CTCFLQ8NI51 663 aaPredicted RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 BEGAINQ9BUH8 593 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 MAD2L2Q9UI95 211 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 NAP1L2Q9ULW6 460 aaPredicted RBP18.66■□□□□ 0.58
CLN6-216ENST00000636876 ADGRA2Q96PE1 1338 aa18.66■□□□□ 0.58
CLN6-216ENST00000636876 RXRAP19793 462 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 KIF5BP33176 963 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 LBX2Q6XYB7 198 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 STAG2Q8N3U4 1231 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 IL27Q8NEV9 243 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 GTF3C2Q8WUA4 911 aaPredicted RBP18.65■□□□□ 0.58
CLN6-216ENST00000636876 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 ATG4CQ96DT6 458 aa18.65■□□□□ 0.58
CLN6-216ENST00000636876 LARP6Q9BRS8 491 aaKnown RBP18.65■□□□□ 0.58
CLN6-216ENST00000636876 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 KLRF2D3W0D1 207 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 TLR2O60603 784 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 TBC1D8O95759 1140 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 SLC16A2P36021 539 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
CLN6-216ENST00000636876 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 POTEEQ6S8J3 1075 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 CCDC144CPQ8IYA2 1237 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 ZNF274Q96GC6 653 aaPredicted RBP18.64■□□□□ 0.57
CLN6-216ENST00000636876 R3HDMLQ9H3Y0 253 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 ADAMTS5Q9UNA0 930 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 HPS5Q9UPZ3 1129 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 NID2Q14112 1375 aa18.64■□□□□ 0.57
CLN6-216ENST00000636876 PDIA3P30101 505 aaKnown RBP18.63■□□□□ 0.57
CLN6-216ENST00000636876 GNAQP50148 359 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 RTN1Q16799 776 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 MB21D1Q8N884 522 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 UBA5Q9GZZ9 404 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 CPVLQ9H3G5 476 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 TSKSQ9UJT2 592 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
CLN6-216ENST00000636876 VWA5AO00534 786 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 ST18O60284 1047 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 FDX1P10109 184 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLN6-216ENST00000636876 C17orf99Q6UX52 265 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
CLN6-216ENST00000636876 ABHD8Q96I13 439 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 RBM28Q9NW13 759 aaKnown RBP18.62■□□□□ 0.57
CLN6-216ENST00000636876 RBPJLQ9UBG7 517 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 MORF4L1Q9UBU8 362 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 CPA4Q9UI42 421 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 TPCN1Q9ULQ1 816 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 RABGAP1Q9Y3P9 1069 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 A0A0G2JMZ2 1700 aa18.62■□□□□ 0.57
CLN6-216ENST00000636876 ZBED4O75132 1171 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 CNMDO75829 334 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 PLEKHA8P1O95397 391 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 BCRP11274 1271 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 PPP2R5BQ15173 497 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 SLC35G1Q2M3R5 365 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 TMTC3Q6ZXV5 915 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 REPS2Q8NFH8 660 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 LZTS2Q9BRK4 669 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 PAGR1Q9BTK6 254 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 SLC38A10Q9HBR0 1119 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 TXNRD2Q9NNW7 524 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 FAM217BQ9NTX9 383 aaPredicted RBP18.61■□□□□ 0.57
CLN6-216ENST00000636876 BTBD7Q9P203 1132 aa18.61■□□□□ 0.57
CLN6-216ENST00000636876 BAZ2BQ9UIF8 2168 aaKnown RBP18.6■□□□□ 0.57
CLN6-216ENST00000636876 CCDC196A0A1B0GTZ2 297 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 CDC27P30260 824 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 FAM110CQ1W6H9 321 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 NBPF11Q86T75 865 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 ADGRF4Q8IZF3 695 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 SRBD1Q8N5C6 995 aaKnown RBP18.6■□□□□ 0.57
CLN6-216ENST00000636876 SPZ1Q9BXG8 430 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 RANBP17Q9H2T7 1088 aaKnown RBP18.6■□□□□ 0.57
CLN6-216ENST00000636876 LIMCH1Q9UPQ0 1083 aa18.6■□□□□ 0.57
CLN6-216ENST00000636876 CTDP1Q9Y5B0 961 aaPredicted RBP18.6■□□□□ 0.57
CLN6-216ENST00000636876 COL11A1P12107 1806 aaPredicted RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 PEX10O60683 326 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 PFKFB2O60825 505 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 SMARCA1P28370 1054 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 ADD1P35611 737 aaKnown RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 SNAP25P60880 206 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 ERVK-24P63145 666 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 CCT2P78371 535 aaKnown RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 STK3Q13188 491 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 TMEM132BQ14DG7 1078 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 NOM1Q5C9Z4 860 aaKnown RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 GPRC5AQ8NFJ5 357 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 RIOX1Q9H6W3 641 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 JMJD4Q9H9V9 463 aa18.59■□□□□ 0.57
CLN6-216ENST00000636876 NCOA5Q9HCD5 579 aaKnown RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 ZNF214Q9UL59 606 aaPredicted RBP18.59■□□□□ 0.57
CLN6-216ENST00000636876 GPR25O00155 361 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms