RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 MB21D1Q8N884 522 aa24.26■■□□□ 1.47
CLN5-215ENST00000636767 OR8K1Q8NGG5 319 aa24.26■■□□□ 1.47
CLN5-215ENST00000636767 CCDC102AQ96A19 550 aa24.26■■□□□ 1.47
CLN5-215ENST00000636767 DNAJC7Q99615 494 aa24.26■■□□□ 1.47
CLN5-215ENST00000636767 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
CLN5-215ENST00000636767 LAMB2P55268 1798 aa24.26■■□□□ 1.47
CLN5-215ENST00000636767 NMT2O60551 498 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 PCP11498 1178 aaKnown RBP24.25■■□□□ 1.47
CLN5-215ENST00000636767 HERVK_113P62684 666 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 LEKR1Q6ZMV7 388 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 LGALS16A8MUM7 142 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 ADSSL1Q8N142 457 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 C4orf32Q8N8J7 132 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 ZNF384Q8TF68 577 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 HAUS4Q9H6D7 363 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 HDAC6Q9UBN7 1215 aa24.25■■□□□ 1.47
CLN5-215ENST00000636767 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.25■■□□□ 1.47
CLN5-215ENST00000636767 ENC1O14682 589 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 LONP1P36776 959 aaKnown RBP24.24■■□□□ 1.47
CLN5-215ENST00000636767 PMS1P54277 932 aaKnown RBP24.24■■□□□ 1.47
CLN5-215ENST00000636767 PFKFB3Q16875 520 aaPredicted RBP24.24■■□□□ 1.47
CLN5-215ENST00000636767 ARL6IP4Q66PJ3 421 aaKnown RBP24.24■■□□□ 1.47
CLN5-215ENST00000636767 CCDC148Q8NFR7 591 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 MYO1CO00159 1063 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 STAT6P42226 847 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 HSP90B2PQ58FF3 399 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 WDR59Q6PJI9 974 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 ZNF507Q8TCN5 953 aa24.24■■□□□ 1.47
CLN5-215ENST00000636767 LUC7L2Q9Y383 392 aaKnown RBP24.24■■□□□ 1.47
CLN5-215ENST00000636767 A0A1W2PQC6 194 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 WTIPA6NIX2 430 aaPredicted RBP24.23■■□□□ 1.47
CLN5-215ENST00000636767 NTSR2O95665 410 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 ATP1A1P05023 1023 aaKnown RBP24.23■■□□□ 1.47
CLN5-215ENST00000636767 USP14P54578 494 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 TFR2Q9UP52 801 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 PDS5AQ29RF7 1337 aaKnown RBP24.23■■□□□ 1.47
CLN5-215ENST00000636767 RREB1Q92766 1687 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 USP17L12C9JPN9 530 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 USP17L21D6R901 530 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 SRLQ86TD4 932 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 MED4Q9NPJ6 270 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 DISC1Q9NRI5 854 aa24.23■■□□□ 1.47
CLN5-215ENST00000636767 RNF216Q9NWF9 866 aaPredicted RBP24.23■■□□□ 1.47
CLN5-215ENST00000636767 FAM205AQ6ZU69 1335 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 PHACTR2O75167 634 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 RPS6KA5O75582 802 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 MMS19Q96T76 1030 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 ACBD3Q9H3P7 528 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 CAPN11Q9UMQ6 739 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 PARP10Q53GL7 1025 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 NAALADL2Q58DX5 795 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 INTS5Q6P9B9 1019 aaKnown RBP24.22■■□□□ 1.47
CLN5-215ENST00000636767 GNL3LQ9NVN8 582 aaKnown RBP24.22■■□□□ 1.47
CLN5-215ENST00000636767 SCN7AQ01118 1682 aa24.22■■□□□ 1.47
CLN5-215ENST00000636767 ORC4O43929 436 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 IVLP07476 585 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 EEF1GP26641 437 aaKnown RBP24.21■■□□□ 1.47
CLN5-215ENST00000636767 FAM47AQ5JRC9 791 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 CCDC122Q5T0U0 273 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 TRIM66O15016 1216 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 CAMTA2O94983 1202 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 PAPD7Q5XG87 772 aaKnown RBP24.21■■□□□ 1.47
CLN5-215ENST00000636767 VIPAS39Q9H9C1 493 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 BTG4Q9NY30 223 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 RRP15Q9Y3B9 282 aaKnown RBP24.21■■□□□ 1.47
CLN5-215ENST00000636767 SAR1BQ9Y6B6 198 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 LAMB1P07942 1786 aa24.21■■□□□ 1.47
CLN5-215ENST00000636767 PES1O00541 588 aaKnown RBP24.2■■□□□ 1.46
CLN5-215ENST00000636767 SRGAP2O75044 1071 aa24.2■■□□□ 1.46
CLN5-215ENST00000636767 THAP9Q9H5L6 903 aa24.2■■□□□ 1.46
CLN5-215ENST00000636767 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
CLN5-215ENST00000636767 MEA1Q16626 185 aa24.2■■□□□ 1.46
CLN5-215ENST00000636767 TRIM34Q9BYJ4 488 aa24.2■■□□□ 1.46
CLN5-215ENST00000636767 RASSF4Q9H2L5 321 aa24.2■■□□□ 1.46
CLN5-215ENST00000636767 SLAIN2Q9P270 581 aa24.2■■□□□ 1.46
CLN5-215ENST00000636767 KLRC4O43908 158 aa24.19■■□□□ 1.46
CLN5-215ENST00000636767 AARSP49588 968 aaKnown RBP eCLIP24.19■■□□□ 1.46
CLN5-215ENST00000636767 KCNB1Q14721 858 aa24.19■■□□□ 1.46
CLN5-215ENST00000636767 FOXR1Q6PIV2 292 aa24.19■■□□□ 1.46
CLN5-215ENST00000636767 BLIDQ8IZY5 108 aa24.19■■□□□ 1.46
CLN5-215ENST00000636767 FAM204AQ9H8W3 233 aa24.19■■□□□ 1.46
CLN5-215ENST00000636767 CCDC87Q9NVE4 849 aa24.19■■□□□ 1.46
CLN5-215ENST00000636767 NIP7Q9Y221 180 aaKnown RBP eCLIP24.19■■□□□ 1.46
CLN5-215ENST00000636767 PP2D1A8MPX8 630 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 ZNF662Q6ZS27 426 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 C10orf67Q8IYJ2 551 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 TRIM47Q96LD4 638 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 CALML3P27482 149 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 TSR1Q2NL82 804 aaKnown RBP24.18■■□□□ 1.46
CLN5-215ENST00000636767 RASGRP4Q8TDF6 673 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 TTYH3Q9C0H2 523 aa24.18■■□□□ 1.46
CLN5-215ENST00000636767 RNF40O75150 1001 aa24.17■■□□□ 1.46
CLN5-215ENST00000636767 SYF2O95926 243 aaKnown RBP24.17■■□□□ 1.46
CLN5-215ENST00000636767 KRT83P78385 493 aa24.17■■□□□ 1.46
CLN5-215ENST00000636767 TTI2Q6NXR4 508 aa24.17■■□□□ 1.46
CLN5-215ENST00000636767 GPKOWQ92917 476 aaPredicted RBP eCLIP24.17■■□□□ 1.46
CLN5-215ENST00000636767 JAKMIP2Q96AA8 810 aa24.17■■□□□ 1.46
CLN5-215ENST00000636767 CAPZA3Q96KX2 299 aa24.17■■□□□ 1.46
CLN5-215ENST00000636767 DOT1LQ8TEK3 1739 aa24.17■■□□□ 1.46
CLN5-215ENST00000636767 VGLL3A8MV65 326 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms