RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 SH2D4AQ9H788 454 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 RBM28Q9NW13 759 aaKnown RBP12.37□□□□□ -0.43
CLN5-213ENST00000636681 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
CLN5-213ENST00000636681 PRR12Q9ULL5 1215 aa12.37□□□□□ -0.43
CLN5-213ENST00000636681 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
CLN5-213ENST00000636681 DDIT3P35638 169 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 SSRP1Q08945 709 aaKnown RBP12.36□□□□□ -0.43
CLN5-213ENST00000636681 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 CYP4F22Q6NT55 531 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 GPAT2Q6NUI2 795 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 BRI3BPQ8WY22 251 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 INTS4Q96HW7 963 aaKnown RBP12.36□□□□□ -0.43
CLN5-213ENST00000636681 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 PTPN18Q99952 460 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 RIOX1Q9H6W3 641 aa12.36□□□□□ -0.43
CLN5-213ENST00000636681 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.36□□□□□ -0.43
CLN5-213ENST00000636681 FAM155AB1AL88 458 aaPredicted RBP12.35□□□□□ -0.43
CLN5-213ENST00000636681 C19orf81C9J6K1 198 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 USP14P54578 494 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 FSTL1Q12841 308 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 GPATCH4Q5T3I0 446 aaKnown RBP12.35□□□□□ -0.43
CLN5-213ENST00000636681 SYDE2Q5VT97 1194 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 RGMBQ6NW40 437 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 COA7Q96BR5 231 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 C12orf42Q96LP6 360 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
CLN5-213ENST00000636681 SPZ1Q9BXG8 430 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 KCNJ14Q9UNX9 436 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 ZDHHC9Q9Y397 364 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
CLN5-213ENST00000636681 FLOT1O75955 427 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 SYT1P21579 422 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 STAT2P52630 851 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 QRICH1Q2TAL8 776 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 BTNL9Q6UXG8 535 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 ATG4CQ96DT6 458 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 R3HDMLQ9H3Y0 253 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 VPS54Q9P1Q0 977 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 SYNPO2Q9UMS6 1093 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
CLN5-213ENST00000636681 CCL15-CCL14A0A0B4J2E2 113 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 CXCL11O14625 94 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 AOC2O75106 756 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
CLN5-213ENST00000636681 CCL15Q16663 113 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 WWC2Q6AWC2 1192 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
CLN5-213ENST00000636681 FAM43AQ8N2R8 423 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 LPAR1Q92633 364 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 MTMR8Q96EF0 704 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
CLN5-213ENST00000636681 RNF26Q9BY78 433 aaPredicted RBP12.34□□□□□ -0.43
CLN5-213ENST00000636681 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
CLN5-213ENST00000636681 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 SLC10A3P09131 477 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 CYP2C8P10632 490 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 GNAQP50148 359 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 USH1GQ495M9 461 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 NOM1Q5C9Z4 860 aaKnown RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 CPLX2Q6PUV4 134 aaKnown RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 CDKL5O76039 1030 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 DEXIO95424 95 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 APLP1P51693 650 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 PFKFB3Q16875 520 aaPredicted RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 LARP1BQ659C4 914 aaKnown RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 FERMT3Q86UX7 667 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 TRIM22Q8IYM9 498 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 RRP36Q96EU6 259 aaKnown RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 ASCC2Q9H1I8 757 aaPredicted RBP12.33□□□□□ -0.44
CLN5-213ENST00000636681 FEM1BQ9UK73 627 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 PPP1R9AQ9ULJ8 1098 aa12.33□□□□□ -0.44
CLN5-213ENST00000636681 ZNF536O15090 1300 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 ZNFX1Q9P2E3 1918 aaKnown RBP12.32□□□□□ -0.44
CLN5-213ENST00000636681 DOCK3Q8IZD9 2030 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L15C9J2P7 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L13C9JLJ4 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L11C9JVI0 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L18D6R9N7 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L22D6RA61 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L17D6RBQ6 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L19D6RCP7 530 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 403.2 ms