RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 PLS1Q14651 629 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 COG2Q14746 738 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARHGEF6Q15052 776 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 LRRC41Q15345 812 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TCTN1Q2MV58 587 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF792Q3KQV3 632 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MUM1L1Q5H9M0 696 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 OLFML2BQ68BL8 750 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAMDC4Q6UXC1 1216 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC39A5Q6ZMH5 540 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 C16orf86Q6ZW13 317 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 C16orf59Q7L2K0 433 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTC6Q86TZ1 520 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 NCAPG2Q86XI2 1143 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 RPAP2Q8IXW5 612 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CPXCR1Q8N123 301 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 LRRC47Q8N1G4 583 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 DEFB123Q8N688 67 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP38Q8NB14 1042 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYLIPQ8WY64 445 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TBC1D5Q92609 795 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 BADQ92934 168 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 GCC1Q96CN9 775 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 KIF1BPQ96EK5 621 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CEP95Q96GE4 821 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAML3Q96JK9 1138 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM227BQ96M60 508 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 AGBL1Q96MI9 1066 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 APBA2Q99767 749 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 HTATIP2Q9BUP3 242 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 OSBPL7Q9BZF2 842 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CRNKL1Q9BZJ0 848 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 UBE2OQ9C0C9 1292 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 KATNBL1Q9H079 304 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 SPATC1LQ9H0A9 340 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 DCTPP1Q9H773 170 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 VCPKMTQ9H867 229 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 RAVER2Q9HCJ3 691 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 PDLIM7Q9NR12 457 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 PDGFCQ9NRA1 345 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 IL17RBQ9NRM6 502 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CLIP2Q9UDT6 1046 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 DDX20Q9UHI6 824 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 RAPGEFL1Q9UHV5 662 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 PNMA3Q9UL41 463 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF214Q9UL59 606 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MTMR7Q9Y216 660 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATP11BQ9Y2G3 1177 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMX2Q9Y320 296 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TELO2Q9Y4R8 837 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TAF6LQ9Y6J9 622 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CITO14578 2027 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 FANCMQ8IYD8 2048 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ROBO3Q96MS0 1386 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYO16Q9Y6X6 1858 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTC28Q96AY4 2481 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 EML5Q05BV3 1969 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 WDFY4Q6ZS81 3184 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 VCANP13611 3396 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SYNRGQ9UMZ2 1314 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF318Q5VUA4 2279 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 OBSL1O75147 1896 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYH10P35580 1976 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 A0A1W2PQ45 241 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 A0A1W2PQY0 241 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 F5H6K3 240 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 POTEB2H3BUK9 544 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 RFXAPO00287 272 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 DLL1O00548 723 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 WDR46O15213 610 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 RNF113AO15541 343 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SEPT4O43236 478 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPAA1O43292 621 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SORBS3O60504 671 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 RAB11FIP3O75154 756 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 FLOT1O75955 427 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ACRP10323 421 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYOGP15173 224 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 MCCP23508 829 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PDE4AP27815 886 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CYP2C18P33260 490 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC16A2P36021 539 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 STAT3P40763 770 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 HAND2P61296 217 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PSMC6P62333 389 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 IRX6P78412 446 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TFAP4Q01664 338 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 KLRC3Q07444 240 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAAP100Q0VG06 881 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 NMIQ13287 307 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PABPC4Q13310 644 aaKnown RBP eCLIP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PDE3AQ14432 1141 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 HIC1Q14526 733 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SNX17Q15036 470 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTF1Q15361 905 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 UBE3CQ15386 1083 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 KCNA10Q16322 511 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC35G1Q2M3R5 365 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SBK1Q52WX2 424 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms