RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 TMC3Q7Z5M5 1100 aa5.6□□□□□ -1.51
VPS8-228ENST00000628962 FCRL2Q96LA5 508 aaPredicted RBP5.6□□□□□ -1.51
VPS8-228ENST00000628962 CNOT11Q9UKZ1 510 aaKnown RBP5.6□□□□□ -1.51
VPS8-228ENST00000628962 IRS2Q9Y4H2 1338 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 SSU72P8A0A1W2PR75 194 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 RGS13O14921 159 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 FKTNO75072 461 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 F13A1P00488 732 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 IGFBP6P24592 240 aaPredicted RBP5.59□□□□□ -1.51
VPS8-228ENST00000628962 GBP1P32455 592 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 ARL4AP40617 200 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 LMNB2Q03252 620 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 TMEM62Q0P6H9 643 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 LAPTM5Q13571 262 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 PUM1Q14671 1186 aaKnown RBP eCLIP5.59□□□□□ -1.51
VPS8-228ENST00000628962 CBX2Q14781 532 aaPredicted RBP5.59□□□□□ -1.51
VPS8-228ENST00000628962 RAB3GAP1Q15042 981 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 TNFRSF12AQ9NP84 129 aa5.59□□□□□ -1.51
VPS8-228ENST00000628962 WTIPA6NIX2 430 aaPredicted RBP5.58□□□□□ -1.52
VPS8-228ENST00000628962 UBOX5O94941 541 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 SYPP08247 313 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 KCNC1P48547 511 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 CEBPAP49715 358 aaPredicted RBP5.58□□□□□ -1.52
VPS8-228ENST00000628962 ST13P50502 369 aaKnown RBP5.58□□□□□ -1.52
VPS8-228ENST00000628962 SLURP1P55000 103 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 NCKAP1LP55160 1127 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 RNF4P78317 190 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 CAMK2GQ13555 558 aaPredicted RBP5.58□□□□□ -1.52
VPS8-228ENST00000628962 SNW1Q13573 536 aaKnown RBP5.58□□□□□ -1.52
VPS8-228ENST00000628962 NBPF9Q3BBW0 867 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 TAF6LQ9Y6J9 622 aa5.58□□□□□ -1.52
VPS8-228ENST00000628962 GRIN3BO60391 1043 aa5.57□□□□□ -1.52
VPS8-228ENST00000628962 PF4P02776 101 aa5.57□□□□□ -1.52
VPS8-228ENST00000628962 PDIA4P13667 645 aaKnown RBP5.57□□□□□ -1.52
VPS8-228ENST00000628962 TAF1CQ15572 869 aaPredicted RBP5.57□□□□□ -1.52
VPS8-228ENST00000628962 SLCO6A1Q86UG4 719 aa5.57□□□□□ -1.52
VPS8-228ENST00000628962 DUSP9Q99956 384 aaKnown RBP5.57□□□□□ -1.52
VPS8-228ENST00000628962 ACSL6Q9UKU0 697 aa5.57□□□□□ -1.52
VPS8-228ENST00000628962 GPR55Q9Y2T6 319 aaPredicted RBP5.57□□□□□ -1.52
VPS8-228ENST00000628962 ZBTB7CA1YPR0 619 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 NUDT19A8MXV4 375 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 PRAMEF1O95521 474 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 PRKCAP17252 672 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 CHMP4BP1P59074 171 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 NBPF12Q5TAG4 269 aaPredicted RBP5.56□□□□□ -1.52
VPS8-228ENST00000628962 RPTNQ6XPR3 784 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 RHOVQ96L33 236 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 GPR20Q99678 358 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 ERVK13-1Q9NX77 482 aa5.56□□□□□ -1.52
VPS8-228ENST00000628962 A0A1W2PQ45 241 aaPredicted RBP5.55□□□□□ -1.52
VPS8-228ENST00000628962 A0A1W2PQY0 241 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 F6X3S4 739 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 SIGLEC6O43699 453 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 LIMS1P48059 325 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 CYP4F8P98187 520 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 VWA3BQ502W6 1294 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 NLGN1Q8N2Q7 840 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS8-228ENST00000628962 USP31Q70CQ4 1352 aa5.55□□□□□ -1.52
VPS8-228ENST00000628962 K7ESM1 405 aa5.54□□□□□ -1.52
VPS8-228ENST00000628962 MPP2Q14168 576 aa5.54□□□□□ -1.52
VPS8-228ENST00000628962 PLEKHN1Q494U1 663 aaPredicted RBP5.54□□□□□ -1.52
VPS8-228ENST00000628962 REC114Q7Z4M0 266 aa5.54□□□□□ -1.52
VPS8-228ENST00000628962 NUP43Q8NFH3 380 aa5.54□□□□□ -1.52
VPS8-228ENST00000628962 MINPP1Q9UNW1 487 aa5.54□□□□□ -1.52
VPS8-228ENST00000628962 IVNS1ABPQ9Y6Y0 642 aa5.54□□□□□ -1.52
VPS8-228ENST00000628962 AKAP8O43823 692 aaKnown RBP5.53□□□□□ -1.52
VPS8-228ENST00000628962 CTSHP09668 335 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 PFKLP17858 780 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 TNFRSF1AP19438 455 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 ENDOUP21128 410 aaKnown RBP5.53□□□□□ -1.52
VPS8-228ENST00000628962 FBLN1P23142 703 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 MAPKAPK2P49137 400 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 ZNF200P98182 395 aaPredicted RBP5.53□□□□□ -1.52
VPS8-228ENST00000628962 ZNF827Q17R98 1081 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 ARSHQ5FYA8 562 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 UBXN11Q5T124 520 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 NPM2Q86SE8 214 aaKnown RBP5.53□□□□□ -1.52
VPS8-228ENST00000628962 PRDM14Q9GZV8 571 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 PALD1Q9ULE6 856 aa5.53□□□□□ -1.52
VPS8-228ENST00000628962 ZNF205O95201 554 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 PLA2G1BP04054 148 aaKnown RBP5.52□□□□□ -1.53
VPS8-228ENST00000628962 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 RAG1P15918 1043 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 MAGEA10P43363 369 aaPredicted RBP5.52□□□□□ -1.53
VPS8-228ENST00000628962 NR1I3Q14994 352 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 NT5DC1Q5TFE4 455 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 ZC3H14Q6PJT7 736 aaKnown RBP5.52□□□□□ -1.53
VPS8-228ENST00000628962 LIPIQ6XZB0 460 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 ADGRG2Q8IZP9 1017 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 TMEM52Q8NDY8 209 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 FNIP1Q8TF40 1166 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 EAF1Q96JC9 268 aaPredicted RBP5.52□□□□□ -1.53
VPS8-228ENST00000628962 SPATA25Q9BR10 227 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 IMPACTQ9P2X3 320 aa5.52□□□□□ -1.53
VPS8-228ENST00000628962 A0A1B0GTL3 188 aa5.51□□□□□ -1.53
VPS8-228ENST00000628962 BMP8BP34820 402 aa5.51□□□□□ -1.53
VPS8-228ENST00000628962 CTSKP43235 329 aa5.51□□□□□ -1.53
VPS8-228ENST00000628962 ADAM17P78536 824 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms