RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 DAB2P98082 770 aa5.84□□□□□ -1.48
VBP1-204ENST00000625964 TMC6Q7Z403 805 aa5.84□□□□□ -1.48
VBP1-204ENST00000625964 HHIPL1Q96JK4 782 aa5.84□□□□□ -1.48
VBP1-204ENST00000625964 CCDC74BQ96LY2 380 aa5.84□□□□□ -1.48
VBP1-204ENST00000625964 MRS2Q9HD23 443 aa5.84□□□□□ -1.48
VBP1-204ENST00000625964 WTIPA6NIX2 430 aaPredicted RBP5.83□□□□□ -1.48
VBP1-204ENST00000625964 UPK3BL1B0FP48 263 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 UPK3BL2E5RIL1 263 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 SDHBP21912 280 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 RTP1P59025 263 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 NMIQ13287 307 aaPredicted RBP5.83□□□□□ -1.48
VBP1-204ENST00000625964 CBX2Q14781 532 aaPredicted RBP5.83□□□□□ -1.48
VBP1-204ENST00000625964 CCDC85BQ15834 202 aaPredicted RBP5.83□□□□□ -1.48
VBP1-204ENST00000625964 TMC4Q7Z404 712 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 HDAC8Q9BY41 377 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 USP40Q9NVE5 1235 aa5.83□□□□□ -1.48
VBP1-204ENST00000625964 IRS2Q9Y4H2 1338 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 PFKLP17858 780 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 LIG3P49916 1009 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 RAB3GAP1Q15042 981 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 ZNF655Q8N720 491 aaPredicted RBP5.82□□□□□ -1.48
VBP1-204ENST00000625964 LINC00116Q8NCU8 138 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 PLCD4Q9BRC7 762 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 FOXP3Q9BZS1 431 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 VTI1BQ9UEU0 232 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 TCFL5Q9UL49 500 aa5.82□□□□□ -1.48
VBP1-204ENST00000625964 C1QTNF3-AMACRE9PGA6 284 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 OVOL3O00110 214 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 MATN3O15232 486 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 SORBS3O60504 671 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 RLBP1P12271 317 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
VBP1-204ENST00000625964 LSRQ86X29 649 aaPredicted RBP5.81□□□□□ -1.48
VBP1-204ENST00000625964 SLC16A11Q8NCK7 471 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 TCTN2Q96GX1 697 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 SORCS2Q96PQ0 1159 aa5.81□□□□□ -1.48
VBP1-204ENST00000625964 TMEM82A0PJX8 343 aa5.8□□□□□ -1.48
VBP1-204ENST00000625964 GRIN3BO60391 1043 aa5.8□□□□□ -1.48
VBP1-204ENST00000625964 ENDOUP21128 410 aaKnown RBP5.8□□□□□ -1.48
VBP1-204ENST00000625964 IGFBP6P24592 240 aaPredicted RBP5.8□□□□□ -1.48
VBP1-204ENST00000625964 MEI1Q5TIA1 1274 aa5.8□□□□□ -1.48
VBP1-204ENST00000625964 CCDC84Q86UT8 332 aaPredicted RBP5.8□□□□□ -1.48
VBP1-204ENST00000625964 FCRL2Q96LA5 508 aaPredicted RBP5.8□□□□□ -1.48
VBP1-204ENST00000625964 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
VBP1-204ENST00000625964 CORINQ9Y5Q5 1042 aa5.8□□□□□ -1.48
VBP1-204ENST00000625964 TAF6LQ9Y6J9 622 aa5.8□□□□□ -1.48
VBP1-204ENST00000625964 FADS2P1A8MWK0 482 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 ITGAEP38570 1179 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 CHMP4BP1P59074 171 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 TARBP2Q15633 366 aaKnown RBP5.79□□□□□ -1.48
VBP1-204ENST00000625964 HSF5Q4G112 596 aaPredicted RBP5.79□□□□□ -1.48
VBP1-204ENST00000625964 SMPD4Q9NXE4 827 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 ITGB3P05106 788 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 CTSHP09668 335 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 TFE3P19532 575 aaPredicted RBP5.79□□□□□ -1.48
VBP1-204ENST00000625964 NR1I3Q14994 352 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 NT5DC1Q5TFE4 455 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 LIPIQ6XZB0 460 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 EAF1Q96JC9 268 aaPredicted RBP5.79□□□□□ -1.48
VBP1-204ENST00000625964 TNFRSF12AQ9NP84 129 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 ACSL6Q9UKU0 697 aa5.79□□□□□ -1.48
VBP1-204ENST00000625964 FSHBP01225 129 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 RNF4P78317 190 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 CYP4F8P98187 520 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 TAF1CQ15572 869 aaPredicted RBP5.78□□□□□ -1.48
VBP1-204ENST00000625964 MAP3K11Q16584 847 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 VWA3BQ502W6 1294 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 CPZQ66K79 652 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 FERMT3Q86UX7 667 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 C1QTNF3Q9BXJ4 246 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 PRR36Q9H6K5 1346 aa5.78□□□□□ -1.48
VBP1-204ENST00000625964 A0A1W2PQ45 241 aaPredicted RBP5.77□□□□□ -1.49
VBP1-204ENST00000625964 A0A1W2PQY0 241 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 SH3D21A4FU49 640 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 NUDT19A8MXV4 375 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 ZNF16P17020 682 aaPredicted RBP5.77□□□□□ -1.49
VBP1-204ENST00000625964 MAPKAPK2P49137 400 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 HMGA2P52926 109 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 NCKAP1LP55160 1127 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 BBS9Q3SYG4 887 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 ZC3H14Q6PJT7 736 aaKnown RBP5.77□□□□□ -1.49
VBP1-204ENST00000625964 TTC9BQ8N6N2 239 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 JARID2Q92833 1246 aaPredicted RBP5.77□□□□□ -1.49
VBP1-204ENST00000625964 WDR26Q9H7D7 661 aa5.77□□□□□ -1.49
VBP1-204ENST00000625964 BPNT1O95861 308 aa5.76□□□□□ -1.49
VBP1-204ENST00000625964 SYPP08247 313 aa5.76□□□□□ -1.49
VBP1-204ENST00000625964 MSL3P1P0C860 447 aa5.76□□□□□ -1.49
VBP1-204ENST00000625964 ST13P50502 369 aaKnown RBP5.76□□□□□ -1.49
VBP1-204ENST00000625964 RPTNQ6XPR3 784 aa5.76□□□□□ -1.49
VBP1-204ENST00000625964 SUSD2Q9UGT4 822 aa5.76□□□□□ -1.49
VBP1-204ENST00000625964 PRKCAP17252 672 aa5.75□□□□□ -1.49
VBP1-204ENST00000625964 GBP1P32455 592 aa5.75□□□□□ -1.49
VBP1-204ENST00000625964 LIMS1P48059 325 aa5.75□□□□□ -1.49
VBP1-204ENST00000625964 PHACTR4Q8IZ21 702 aa5.75□□□□□ -1.49
VBP1-204ENST00000625964 FNIP1Q8TF40 1166 aa5.75□□□□□ -1.49
VBP1-204ENST00000625964 GPR55Q9Y2T6 319 aaPredicted RBP5.75□□□□□ -1.49
VBP1-204ENST00000625964 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 CHURC1-FNTBB4DL54 471 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 FKTNO75072 461 aa5.74□□□□□ -1.49
VBP1-204ENST00000625964 PLEKHN1Q494U1 663 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms