RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 PTPDC1A2A3K4 754 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 BTBD19C9JJ37 291 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 PEX10O60683 326 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 AOC2O75106 756 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 FLOT1O75955 427 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 FDPSP14324 419 aaKnown RBP19.29■□□□□ 0.68
CCNA1-203ENST00000625767 IFNAR1P17181 557 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 STAT2P52630 851 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 DEFB115Q30KQ5 88 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 SLC26A6Q9BXS9 759 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 JMJD4Q9H9V9 463 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 PRR12Q9ULL5 1215 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
CCNA1-203ENST00000625767 CCDC196A0A1B0GTZ2 297 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 SYDE2Q5VT97 1194 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 POTEEQ6S8J3 1075 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 BTNL9Q6UXG8 535 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 CATSPERGQ6ZRH7 1159 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 HOMER1Q86YM7 354 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 FAM43AQ8N2R8 423 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 AIFM3Q96NN9 605 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 RIOX1Q9H6W3 641 aa19.28■□□□□ 0.68
CCNA1-203ENST00000625767 DHX16O60231 1041 aaKnown RBP19.27■□□□□ 0.68
CCNA1-203ENST00000625767 CETPP11597 493 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 CCDC102AQ96A19 550 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 ATG4CQ96DT6 458 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 CAPNS2Q96L46 248 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 PIGSQ96S52 555 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 FEM1BQ9UK73 627 aa19.27■□□□□ 0.68
CCNA1-203ENST00000625767 V9GY48 417 aaPredicted RBP19.27■□□□□ 0.68
CCNA1-203ENST00000625767 USP17L15C9J2P7 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L11C9JVI0 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L18D6R9N7 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L22D6RA61 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L19D6RCP7 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L20D6RJB6 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 IGF2BP3O00425 579 aaKnown RBP eCLIP19.27■□□□□ 0.67
CCNA1-203ENST00000625767 USP17L24Q0WX57 530 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 PPP2R5BQ15173 497 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.67
CCNA1-203ENST00000625767 SPZ1Q9BXG8 430 aa19.27■□□□□ 0.67
CCNA1-203ENST00000625767 A0A0G2JMZ2 1700 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 FMNL1O95466 1100 aaPredicted RBP19.26■□□□□ 0.67
CCNA1-203ENST00000625767 CYP2C8P10632 490 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 GNAQP50148 359 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 FOSBP53539 338 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 PKN1Q16512 942 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 SHISA4Q96DD7 197 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 SLF1Q9BQI6 1058 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 ASCC2Q9H1I8 757 aaPredicted RBP19.26■□□□□ 0.67
CCNA1-203ENST00000625767 GJB4Q9NTQ9 266 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 PPP1R9AQ9ULJ8 1098 aa19.26■□□□□ 0.67
CCNA1-203ENST00000625767 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 PPP1R11O60927 126 aaPredicted RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 GJB2P29033 226 aa19.25■□□□□ 0.67
CCNA1-203ENST00000625767 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 C1QTNF8P60827 252 aa19.25■□□□□ 0.67
CCNA1-203ENST00000625767 KIF23Q02241 960 aaPredicted RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 P2RX7Q99572 595 aaKnown RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 ORC3Q9UBD5 711 aaPredicted RBP19.25■□□□□ 0.67
CCNA1-203ENST00000625767 SPDYE16A6NNV3 312 aaPredicted RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 PDHXO00330 501 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 PLA2G6O60733 806 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 DSG3P32926 999 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 VEGFBP49765 207 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 CDC37Q16543 378 aaPredicted RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 CPLX2Q6PUV4 134 aaKnown RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 FAM160B2Q86V87 743 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 CHURC1Q8WUH1 139 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 GPKOWQ92917 476 aaPredicted RBP eCLIP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 MTMR8Q96EF0 704 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 LZTS2Q9BRK4 669 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 MANSC4A6NHS7 340 aaPredicted RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 COG2Q14746 738 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 QRICH1Q2TAL8 776 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 CCDC174Q6PII3 467 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 INTS4Q96HW7 963 aaKnown RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 RNF26Q9BY78 433 aaPredicted RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 SMC3Q9UQE7 1217 aa19.24■□□□□ 0.67
CCNA1-203ENST00000625767 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.24■□□□□ 0.67
CCNA1-203ENST00000625767 PRPF3O43395 683 aaKnown RBP19.23■□□□□ 0.67
CCNA1-203ENST00000625767 IRX3P78415 501 aaPredicted RBP19.23■□□□□ 0.67
CCNA1-203ENST00000625767 ANKRD23Q86SG2 305 aa19.23■□□□□ 0.67
CCNA1-203ENST00000625767 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
CCNA1-203ENST00000625767 RANBP17Q9H2T7 1088 aaKnown RBP19.23■□□□□ 0.67
CCNA1-203ENST00000625767 VWA5AO00534 786 aa19.22■□□□□ 0.67
CCNA1-203ENST00000625767 CDKL5O76039 1030 aa19.22■□□□□ 0.67
CCNA1-203ENST00000625767 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
CCNA1-203ENST00000625767 TYW1BQ6NUM6 668 aa19.22■□□□□ 0.67
CCNA1-203ENST00000625767 COA7Q96BR5 231 aa19.22■□□□□ 0.67
CCNA1-203ENST00000625767 RRP36Q96EU6 259 aaKnown RBP19.22■□□□□ 0.67
CCNA1-203ENST00000625767 ZNF536O15090 1300 aa19.22■□□□□ 0.67
CCNA1-203ENST00000625767 WDR33Q9C0J8 1336 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms