RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
PTCHD3-202ENST00000622555 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
PTCHD3-202ENST00000622555 IRF6O14896 467 aa20.6■□□□□ 0.89
PTCHD3-202ENST00000622555 SYDE2Q5VT97 1194 aa20.6■□□□□ 0.89
PTCHD3-202ENST00000622555 C12orf42Q96LP6 360 aa20.6■□□□□ 0.89
PTCHD3-202ENST00000622555 PIGSQ96S52 555 aa20.6■□□□□ 0.89
PTCHD3-202ENST00000622555 JMJD4Q9H9V9 463 aa20.6■□□□□ 0.89
PTCHD3-202ENST00000622555 SCG2P13521 617 aa20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 PDIA4P13667 645 aaKnown RBP20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 PFKFB3Q16875 520 aaPredicted RBP20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 BTNL9Q6UXG8 535 aa20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 CHURC1Q8WUH1 139 aa20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 TANGO6Q9C0B7 1094 aa20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 FEM1BQ9UK73 627 aa20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 WDR33Q9C0J8 1336 aaKnown RBP20.59■□□□□ 0.89
PTCHD3-202ENST00000622555 TOMM70O94826 608 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 GUCY1B3Q02153 619 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 TRIM29Q14134 588 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 SH3D19Q5HYK7 790 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 OTUD7BQ6GQQ9 843 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 FAM160B2Q86V87 743 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 RPAP3Q9H6T3 665 aaPredicted RBP20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 GJB4Q9NTQ9 266 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 MTMR6Q9Y217 621 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 LOC285556D6RIA3 1793 aa20.58■□□□□ 0.89
PTCHD3-202ENST00000622555 CXCL11O14625 94 aa20.58■□□□□ 0.88
PTCHD3-202ENST00000622555 SAMD1Q6SPF0 538 aaPredicted RBP20.58■□□□□ 0.88
PTCHD3-202ENST00000622555 ZNF784Q8NCA9 323 aaPredicted RBP20.58■□□□□ 0.88
PTCHD3-202ENST00000622555 KCNH4Q9UQ05 1017 aa20.58■□□□□ 0.88
PTCHD3-202ENST00000622555 ZDHHC9Q9Y397 364 aa20.58■□□□□ 0.88
PTCHD3-202ENST00000622555 PARP14Q460N5 1801 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 PLA2G6O60733 806 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 BRD1O95696 1058 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 XBP1P17861 261 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 HUNKP57058 714 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 FBXO18Q8NFZ0 1043 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 GPKOWQ92917 476 aaPredicted RBP eCLIP20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 KIFC2Q96AC6 838 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 FBXO28Q9NVF7 368 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 VPS54Q9P1Q0 977 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 PRR12Q9ULL5 1215 aa20.57■□□□□ 0.88
PTCHD3-202ENST00000622555 A0A0G2JLL6 359 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 ZSCAN22P10073 491 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 GJA5P36382 358 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 NFKBIBQ15653 356 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 KRT40Q6A162 431 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 HEATR3Q7Z4Q2 680 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 PRRT2Q7Z6L0 340 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 MTMR8Q96EF0 704 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 PNMA6FA0A0J9YX94 578 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 ZBTB5O15062 677 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 FLOT1O75955 427 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 CDC37Q16543 378 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 WWC2Q6AWC2 1192 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 GADL1Q6ZQY3 521 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 WNK4Q96J92 1243 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 SLF1Q9BQI6 1058 aa20.56■□□□□ 0.88
PTCHD3-202ENST00000622555 SNAP25P60880 206 aa20.55■□□□□ 0.88
PTCHD3-202ENST00000622555 QRICH1Q2TAL8 776 aa20.55■□□□□ 0.88
PTCHD3-202ENST00000622555 SNAPC2Q13487 334 aa20.54■□□□□ 0.88
PTCHD3-202ENST00000622555 MCTP1Q6DN14 999 aa20.54■□□□□ 0.88
PTCHD3-202ENST00000622555 PROCA1Q8NCQ7 364 aaPredicted RBP20.54■□□□□ 0.88
PTCHD3-202ENST00000622555 RGS22Q8NE09 1264 aa20.54■□□□□ 0.88
PTCHD3-202ENST00000622555 KCNJ14Q9UNX9 436 aa20.54■□□□□ 0.88
PTCHD3-202ENST00000622555 RLFQ13129 1914 aa20.54■□□□□ 0.88
PTCHD3-202ENST00000622555 MKRN3Q13064 507 aaKnown RBP20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 FERMT3Q86UX7 667 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 PRPF38AQ8NAV1 312 aaKnown RBP20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 SHISA4Q96DD7 197 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 SH3GLB2Q9NR46 395 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 BARHL2Q9NY43 387 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L15C9J2P7 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L13C9JLJ4 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L11C9JVI0 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L18D6R9N7 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L22D6RA61 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L17D6RBQ6 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L19D6RCP7 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L20D6RJB6 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 hCG_1984214I3L0E3 225 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 STXBP3O00186 592 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 F13A1P00488 732 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 USP17L24Q0WX57 530 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 TREML2Q5T2D2 321 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 CATSPERGQ6ZRH7 1159 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 SAPCD2Q86UD0 394 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 ZNF713Q8N859 430 aaPredicted RBP20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 PPP1R9AQ9ULJ8 1098 aa20.53■□□□□ 0.88
PTCHD3-202ENST00000622555 PPP1R11O60927 126 aaPredicted RBP20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 MMP1P03956 469 aa20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 NAPAP54920 295 aa20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 FSTL1Q12841 308 aa20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 SAFBQ15424 915 aaKnown RBP eCLIP20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 SPRYD7Q5W111 196 aa20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 FASTKD5Q7L8L6 764 aaKnown RBP20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 CCDC148Q8NFR7 591 aa20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 COA7Q96BR5 231 aa20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 PHF20Q9BVI0 1012 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms