RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GOLGA1Q92805 767 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 DESI2Q9BSY9 194 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 UBXN6Q9BZV1 441 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 CUEDC2Q9H467 287 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 MAGEF1Q9HAY2 307 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 MAD2L2Q9UI95 211 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 CDK5RAP2Q96SN8 1893 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 LTBP4Q8N2S1 1624 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 DDX60LQ5H9U9 1706 aaKnown RBP10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 MYH1P12882 1939 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 MYH8P13535 1937 aa10.86□□□□□ -0.67
IGHV3-54-201ENST00000622166 A0A1W2PQC6 194 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 KCNJ18B7U540 433 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 STXBP3O00186 592 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 N4BP3O15049 544 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 KLRC4O43908 158 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 LDHBP07195 334 aaKnown RBP10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 SMARCA1P28370 1054 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 FXR1P51114 621 aaKnown RBP eCLIP10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 KCNJ12Q14500 433 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 CYP26C1Q6V0L0 522 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 DTHD1Q6ZMT9 781 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 SRGAP1Q7Z6B7 1085 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 TXNRD3Q86VQ6 643 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 DZIP1Q86YF9 867 aaKnown RBP10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 CCDC12Q8WUD4 166 aaPredicted RBP10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 STAMQ92783 540 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 THAP9Q9H5L6 903 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 DISC1Q9NRI5 854 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 MYO1AQ9UBC5 1043 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 SRP68Q9UHB9 627 aaKnown RBP10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 CDC23Q9UJX2 597 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 TAF1LQ8IZX4 1826 aa10.85□□□□□ -0.67
IGHV3-54-201ENST00000622166 CCDC194A0A1B0GVG4 234 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 POTEB2H3BUK9 544 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 KIF5CO60282 957 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 ZPR1O75312 459 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 RHOBTB3O94955 611 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 BAG3O95817 575 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 EEF1GP26641 437 aaKnown RBP10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 STAT6P42226 847 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 PRCPP42785 496 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 USP5P45974 858 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 ERVK-24P63145 666 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 ORC2Q13416 577 aaPredicted RBP10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 BRD3Q15059 726 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 VPS72Q15906 364 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 NAALADL2Q58DX5 795 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 CC2D1AQ6P1N0 951 aaPredicted RBP10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 IRF2BP1Q8IU81 584 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 AMOTL1Q8IY63 956 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 CEP112Q8N8E3 955 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 SH3RF3Q8TEJ3 882 aaPredicted RBP10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 CPLX3Q8WVH0 158 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 ABHD10Q9NUJ1 306 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 KBTBD4Q9NVX7 518 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 TAB2Q9NYJ8 693 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 LY75O60449 1722 aa10.84□□□□□ -0.67
IGHV3-54-201ENST00000622166 LGALS16A8MUM7 142 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 TBC1D8O95759 1140 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 RASA1P20936 1047 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 PPP1R2P41236 205 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 ARHGAP25P42331 645 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 GRAPQ13588 217 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 COBLL1Q53SF7 1204 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 TEX35Q5T0J7 233 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 TYW1BQ6NUM6 668 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF662Q6ZS27 426 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 KRT25Q7Z3Z0 450 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF444Q8N0Y2 327 aaPredicted RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 MB21D1Q8N884 522 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 MSANTD4Q8NCY6 345 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 GIMAP8Q8ND71 665 aaPredicted RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 GRAPLQ8TC17 118 aaPredicted RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 ZNF507Q8TCN5 953 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 GPKOWQ92917 476 aaPredicted RBP eCLIP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 DHTKD1Q96HY7 919 aaPredicted RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 AK8Q96MA6 479 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 TMEM47Q9BQJ4 181 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 PARD6BQ9BYG5 372 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 VPS16Q9H269 839 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 TMEM60Q9H2L4 133 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 MKNK2Q9HBH9 465 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 GDAQ9Y2T3 454 aa10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 BAZ2BQ9UIF8 2168 aaKnown RBP10.83□□□□□ -0.68
IGHV3-54-201ENST00000622166 NUTM2BA6NNL0 878 aaPredicted RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 NUTM2EB1AL46 878 aaPredicted RBP10.82□□□□□ -0.68
IGHV3-54-201ENST00000622166 RNF225M0QZC1 329 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms