RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 CDC25AP30304 524 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 ASIC1P78348 528 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 APBA1Q02410 837 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 XAGE3Q8WTP9 111 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 MCUR1Q96AQ8 359 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 LRRC45Q96CN5 670 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 AMOTL2Q9Y2J4 779 aa13.83□□□□□ -0.2
SYNRG-229ENST00000621136 HSPD1P10809 573 aaKnown RBP13.82□□□□□ -0.2
SYNRG-229ENST00000621136 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 SEPT6Q14141 434 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 CCDC57Q2TAC2 916 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 BEND6Q5SZJ8 279 aaPredicted RBP13.82□□□□□ -0.2
SYNRG-229ENST00000621136 KRT40Q6A162 431 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 TEX33O43247 280 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 RFC1P35251 1148 aaPredicted RBP13.82□□□□□ -0.2
SYNRG-229ENST00000621136 COPS6Q7L5N1 327 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 TAOK3Q9H2K8 898 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 TFR2Q9UP52 801 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 IKBKBO14920 756 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 ZNF185O15231 689 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
SYNRG-229ENST00000621136 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
SYNRG-229ENST00000621136 LLGL1Q15334 1064 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 NLRP14Q86W24 1093 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 UBXN6Q9BZV1 441 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 MLXIPLQ9NP71 852 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
SYNRG-229ENST00000621136 A0A087WZG4 1122 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 PDE4BQ07343 736 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 HAUS4Q9H6D7 363 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 EIF3HO15372 352 aaKnown RBP eCLIP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 LUC7L3O95232 432 aaKnown RBP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 TRIM10Q9UDY6 481 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 NEO1Q92859 1461 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 RGS16O15492 202 aaPredicted RBP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 CMA1P23946 247 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 CDC27P30260 824 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 RAPGEF1Q13905 1077 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 NBPF14Q5TI25 921 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 DDX23Q9BUQ8 820 aaKnown RBP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 NACAP1Q9BZK3 213 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 RHBDL2Q9NX52 303 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 GCKRQ14397 625 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 CFAP157Q5JU67 520 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 DIS3L2Q8IYB7 885 aaKnown RBP13.81□□□□□ -0.2
SYNRG-229ENST00000621136 ANKRD24Q8TF21 1146 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 EXOC1Q9NV70 894 aa13.81□□□□□ -0.2
SYNRG-229ENST00000621136 LTKP29376 864 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 PSMC4P43686 418 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 EPHB4P54760 987 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 PTPN12Q05209 780 aaKnown RBP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 VPS36Q86VN1 386 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 TMEM139Q8IV31 216 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 NEURL1BA8MQ27 555 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 EHHADHQ08426 723 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 DZIP1Q86YF9 867 aaKnown RBP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 FAM114A1Q8IWE2 563 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 CCT8L2Q96SF2 557 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 HAUS7Q99871 368 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 ACTR5Q9H9F9 607 aaPredicted RBP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 KCNK3O14649 394 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 RWDD2BP57060 319 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 KCNB1Q14721 858 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 TTF1Q15361 905 aaPredicted RBP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 CSGALNACT2Q8N6G5 542 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 ZNF274Q96GC6 653 aaPredicted RBP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 MMS19Q96T76 1030 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 SMARCAL1Q9NZC9 954 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 SETD1AO15047 1707 aaKnown RBP13.8□□□□□ -0.2
SYNRG-229ENST00000621136 CEMIPQ8WUJ3 1361 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 CRYBG1Q9Y4K1 1723 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 A1BGP04217 495 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 ZNF449Q6P9G9 518 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 RRAGAQ7L523 313 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 DYDC2Q96IM9 177 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 NOX5Q96PH1 765 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 ZNF711Q9Y462 761 aa13.8□□□□□ -0.2
SYNRG-229ENST00000621136 CHD2O14647 1828 aaKnown RBP13.79□□□□□ -0.2
SYNRG-229ENST00000621136 PAK1Q13153 545 aa13.79□□□□□ -0.2
SYNRG-229ENST00000621136 SHC4Q6S5L8 630 aa13.79□□□□□ -0.2
SYNRG-229ENST00000621136 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
SYNRG-229ENST00000621136 WHAMMQ8TF30 809 aa13.79□□□□□ -0.2
SYNRG-229ENST00000621136 RPGRIP1Q96KN7 1286 aa13.79□□□□□ -0.2
SYNRG-229ENST00000621136 INTS9Q9NV88 658 aaKnown RBP13.79□□□□□ -0.2
SYNRG-229ENST00000621136 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
SYNRG-229ENST00000621136 HDLBPQ00341 1268 aaKnown RBP13.79□□□□□ -0.2
SYNRG-229ENST00000621136 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
SYNRG-229ENST00000621136 ARL10Q8N8L6 244 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms