RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 SHCBP1Q8NEM2 672 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 IGDCC4Q8TDY8 1250 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 MTA3Q9BTC8 594 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 SLC38A10Q9HBR0 1119 aa21.42■■□□□ 1.02
LITAF-220ENST00000620789 CWC22Q9HCG8 908 aaKnown RBP21.42■■□□□ 1.02
LITAF-220ENST00000620789 FLT3LGP49771 235 aa21.41■■□□□ 1.02
LITAF-220ENST00000620789 COL9A3Q14050 684 aaPredicted RBP21.41■■□□□ 1.02
LITAF-220ENST00000620789 TMEM67Q5HYA8 995 aa21.41■■□□□ 1.02
LITAF-220ENST00000620789 WDR78Q5VTH9 848 aa21.41■■□□□ 1.02
LITAF-220ENST00000620789 BTNL9Q6UXG8 535 aa21.41■■□□□ 1.02
LITAF-220ENST00000620789 NEK1Q96PY6 1258 aa21.41■■□□□ 1.02
LITAF-220ENST00000620789 GPCPD1Q9NPB8 672 aa21.41■■□□□ 1.02
LITAF-220ENST00000620789 CTDP1Q9Y5B0 961 aaPredicted RBP21.41■■□□□ 1.02
LITAF-220ENST00000620789 ATP2A1O14983 1001 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 SLC25A27O95847 323 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 ERCC3P19447 782 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 STAT3P40763 770 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 ADCK5Q3MIX3 580 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 GPATCH4Q5T3I0 446 aaKnown RBP21.4■■□□□ 1.02
LITAF-220ENST00000620789 TTBK2Q6IQ55 1244 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 RIOX2Q8IUF8 465 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 RAET1EQ8TD07 263 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 TMEM87BQ96K49 555 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 TEX13BQ9BXU2 312 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 USP26Q9BXU7 913 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 MROH8Q9H579 483 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 SENP2Q9HC62 589 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 GJD2Q9UKL4 321 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 PRR12Q9ULL5 1215 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 PLXNB2O15031 1838 aa21.4■■□□□ 1.02
LITAF-220ENST00000620789 DOCK3Q8IZD9 2030 aa21.39■■□□□ 1.02
LITAF-220ENST00000620789 SLC16A2P36021 539 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 IRF5Q13568 498 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 NCAPG2Q86XI2 1143 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 SOCS4Q8WXH5 440 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 LY9Q9HBG7 655 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 IVNS1ABPQ9Y6Y0 642 aa21.39■■□□□ 1.01
LITAF-220ENST00000620789 SH2B2O14492 632 aaPredicted RBP21.38■■□□□ 1.01
LITAF-220ENST00000620789 GOLGA8HP0CJ92 632 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 COPB2P35606 906 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 OAZ1P54368 228 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 ASPRV1Q53RT3 343 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 MORN1Q5T089 497 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 SYDE2Q5VT97 1194 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 SNRNP48Q6IEG0 339 aaKnown RBP21.38■■□□□ 1.01
LITAF-220ENST00000620789 CPXCR1Q8N123 301 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 NUDT12Q9BQG2 462 aa21.38■■□□□ 1.01
LITAF-220ENST00000620789 RAVER2Q9HCJ3 691 aaKnown RBP21.38■■□□□ 1.01
LITAF-220ENST00000620789 WDR19Q8NEZ3 1342 aa21.37■■□□□ 1.01
LITAF-220ENST00000620789 HMGB1P09429 215 aaKnown RBP21.37■■□□□ 1.01
LITAF-220ENST00000620789 PARP1P09874 1014 aaKnown RBP21.37■■□□□ 1.01
LITAF-220ENST00000620789 PTPREP23469 700 aa21.37■■□□□ 1.01
LITAF-220ENST00000620789 SLC9C1Q4G0N8 1177 aa21.37■■□□□ 1.01
LITAF-220ENST00000620789 USP6NLQ92738 828 aa21.37■■□□□ 1.01
LITAF-220ENST00000620789 GPHNQ9NQX3 736 aaPredicted RBP21.37■■□□□ 1.01
LITAF-220ENST00000620789 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
LITAF-220ENST00000620789 CENPFP49454 3210 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 ZNF536O15090 1300 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 SLC15A5A6NIM6 579 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 STRNO43815 780 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 EIF5BO60841 1220 aaKnown RBP21.36■■□□□ 1.01
LITAF-220ENST00000620789 GRK4P32298 578 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 EXOSC10Q01780 885 aaKnown RBP21.36■■□□□ 1.01
LITAF-220ENST00000620789 GRB14Q14449 540 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 DHX32Q7L7V1 743 aaKnown RBP21.36■■□□□ 1.01
LITAF-220ENST00000620789 CATIPQ7Z7H3 387 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 TMTC2Q8N394 836 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 SLAIN1Q8ND83 568 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 JAKMIP1Q96N16 626 aaKnown RBP21.36■■□□□ 1.01
LITAF-220ENST00000620789 RANBP17Q9H2T7 1088 aaKnown RBP21.36■■□□□ 1.01
LITAF-220ENST00000620789 ZNF236Q9UL36 1845 aa21.36■■□□□ 1.01
LITAF-220ENST00000620789 ADCY3O60266 1144 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 RGS2P41220 211 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 LIFRP42702 1097 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 SNAP25P60880 206 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 TROAPQ12815 778 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 NBPF11Q86T75 865 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 PXYLP1Q8TE99 480 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 SH3TC2Q8TF17 1288 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 ARMC5Q96C12 935 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 LRRC2Q9BYS8 371 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 RIPK3Q9Y572 518 aa21.35■■□□□ 1.01
LITAF-220ENST00000620789 CYP2B6P20813 491 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 SLC4A3P48751 1232 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 MAP2K5Q13163 448 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 GRM4Q14833 912 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 CCDC174Q6PII3 467 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 NFXL1Q6ZNB6 911 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 ZNF654Q8IZM8 581 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 ABRAQ8N0Z2 381 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 UBA5Q9GZZ9 404 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 CPVLQ9H3G5 476 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 MAD2L2Q9UI95 211 aa21.34■■□□□ 1.01
LITAF-220ENST00000620789 CCDC69A6NI79 296 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 DDAH1O94760 285 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 FCER1AP12319 257 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 XRCC5P13010 732 aaKnown RBP21.33■■□□□ 1.01
LITAF-220ENST00000620789 ELNP15502 786 aa21.33■■□□□ 1.01
LITAF-220ENST00000620789 PSMA5P28066 241 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms