RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 TXLNAP40222 546 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 PBX1P40424 430 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 PRCPP42785 496 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 PAK1Q13153 545 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 ARL6IP4Q66PJ3 421 aaKnown RBP12.66□□□□□ -0.38
TP53-223ENST00000618944 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 PANX2Q96RD6 677 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 USP21Q9UK80 565 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
TP53-223ENST00000618944 STXBP3O00186 592 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 UFL1O94874 794 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 GYPCP04921 128 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 GNAQP50148 359 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 ZNF658Q5TYW1 1059 aaPredicted RBP12.66□□□□□ -0.38
TP53-223ENST00000618944 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
TP53-223ENST00000618944 CD209Q9NNX6 404 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 RWDD2AQ9UIY3 292 aa12.66□□□□□ -0.38
TP53-223ENST00000618944 SCN7AQ01118 1682 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 TRIM49BA6NDI0 452 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 M0R2N6 131 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 CCDC175P0C221 793 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 CDK8P49336 464 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 PPP4CP60510 307 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 EEF2KMTQ96G04 330 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 EYA3Q99504 573 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 RTFDC1Q9BY42 306 aaPredicted RBP12.65□□□□□ -0.38
TP53-223ENST00000618944 DISC1Q9NRI5 854 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
TP53-223ENST00000618944 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 GOLGA6L9A6NEM1 432 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 KCNJ18B7U540 433 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 MFAP3LO75121 409 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 LDHCP07864 332 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 UBA7P41226 1012 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 CLCN6P51797 869 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 MAP3K9P80192 1104 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 DMTNQ08495 405 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 KCNJ12Q14500 433 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 NAALADL2Q58DX5 795 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 TCP11X2Q5H9J9 407 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 A0A1B0GUL6 1792 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 PES1O00541 588 aaKnown RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 TADA3O75528 432 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 COPB1P53618 953 aaKnown RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 PMS1P54277 932 aaKnown RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 NAPAP54920 295 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 LETM2Q2VYF4 491 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 CCDC12Q8WUD4 166 aaPredicted RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 KIFC2Q96AC6 838 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 NUP88Q99567 741 aaPredicted RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 ZSWIM4Q9H7M6 989 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 LRRC4BQ9NT99 713 aa12.64□□□□□ -0.39
TP53-223ENST00000618944 LIMA1Q9UHB6 759 aaKnown RBP12.64□□□□□ -0.39
TP53-223ENST00000618944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
TP53-223ENST00000618944 CCNT1O60563 726 aaKnown RBP12.63□□□□□ -0.39
TP53-223ENST00000618944 LRRC15Q8TF66 581 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 RMND1Q9NWS8 449 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 A0A0U1RQG5 324 aaPredicted RBP12.63□□□□□ -0.39
TP53-223ENST00000618944 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 ABL1P00519 1130 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 UBXN1Q04323 297 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 KRT222Q8N1A0 295 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 ACRBPQ8NEB7 543 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 CCDC148Q8NFR7 591 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 SRRTQ9BXP5 876 aaKnown RBP12.63□□□□□ -0.39
TP53-223ENST00000618944 ST7Q9NRC1 585 aa12.63□□□□□ -0.39
TP53-223ENST00000618944 LRRC10BA6NIK2 292 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 TPM1P09493 284 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 TEX35Q5T0J7 233 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 CEP95Q96GE4 821 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 EFCAB8A8MWE9 144 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 SEC31AO94979 1220 aaKnown RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 ERVK-24P63145 666 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 ZNF569Q5MCW4 686 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 CNGA4Q8IV77 575 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 PIGSQ96S52 555 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 NAA15Q9BXJ9 866 aaKnown RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 MRFAP1Q9Y605 127 aa12.62□□□□□ -0.39
TP53-223ENST00000618944 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
TP53-223ENST00000618944 GPR75-ASB3A0A0A6YYF3 556 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms