RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 MSL3Q8N5Y2 521 aaKnown RBP22.96■■□□□ 1.27
NEK3-208ENST00000618534 C4orf32Q8N8J7 132 aa22.96■■□□□ 1.27
NEK3-208ENST00000618534 FAN1Q9Y2M0 1017 aa22.96■■□□□ 1.27
NEK3-208ENST00000618534 H7C1D1 291 aa22.95■■□□□ 1.26
NEK3-208ENST00000618534 LONP1P36776 959 aaKnown RBP22.95■■□□□ 1.26
NEK3-208ENST00000618534 PMS1P54277 932 aaKnown RBP22.95■■□□□ 1.26
NEK3-208ENST00000618534 GOLGA5Q8TBA6 731 aa22.95■■□□□ 1.26
NEK3-208ENST00000618534 GBP3Q9H0R5 595 aa22.95■■□□□ 1.26
NEK3-208ENST00000618534 FAM205AQ6ZU69 1335 aa22.95■■□□□ 1.26
NEK3-208ENST00000618534 ARL6IP4Q66PJ3 421 aaKnown RBP22.94■■□□□ 1.26
NEK3-208ENST00000618534 ADSSL1Q8N142 457 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 MB21D1Q8N884 522 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 DOT1LQ8TEK3 1739 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 A0A0G2JS52 829 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 LGALS16A8MUM7 142 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 EXOC5O00471 708 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 ORC4O43929 436 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 OR8K1Q8NGG5 319 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 HDAC6Q9UBN7 1215 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 TFR2Q9UP52 801 aa22.94■■□□□ 1.26
NEK3-208ENST00000618534 PES1O00541 588 aaKnown RBP22.93■■□□□ 1.26
NEK3-208ENST00000618534 ENC1O14682 589 aa22.93■■□□□ 1.26
NEK3-208ENST00000618534 TRAPPC11Q7Z392 1133 aa22.93■■□□□ 1.26
NEK3-208ENST00000618534 CYP2D6P10635 497 aa22.93■■□□□ 1.26
NEK3-208ENST00000618534 RASGRP4Q8TDF6 673 aa22.93■■□□□ 1.26
NEK3-208ENST00000618534 DNAJC7Q99615 494 aa22.93■■□□□ 1.26
NEK3-208ENST00000618534 DISC1Q9NRI5 854 aa22.93■■□□□ 1.26
NEK3-208ENST00000618534 TAF1P21675 1872 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 SCN7AQ01118 1682 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 LRRIQ3A6PVS8 624 aaPredicted RBP22.92■■□□□ 1.26
NEK3-208ENST00000618534 PP2D1A8MPX8 630 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 ACTN2P35609 894 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 HERVK_113P62684 666 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 UBE4AQ14139 1066 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 NAALADL2Q58DX5 795 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 CAVIN4Q5BKX8 364 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 C3orf67Q6ZVT6 689 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 GPKOWQ92917 476 aaPredicted RBP eCLIP22.92■■□□□ 1.26
NEK3-208ENST00000618534 RNF216Q9NWF9 866 aaPredicted RBP22.92■■□□□ 1.26
NEK3-208ENST00000618534 LUC7L2Q9Y383 392 aaKnown RBP22.92■■□□□ 1.26
NEK3-208ENST00000618534 PSMD14O00487 310 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 ATP6V1AP38606 617 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 WDR93Q6P2C0 686 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 ANKRD18AQ8IVF6 992 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 BLIDQ8IZY5 108 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 CCDC102AQ96A19 550 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 HAUS4Q9H6D7 363 aa22.92■■□□□ 1.26
NEK3-208ENST00000618534 TUBBP07437 444 aa22.91■■□□□ 1.26
NEK3-208ENST00000618534 WDR59Q6PJI9 974 aa22.91■■□□□ 1.26
NEK3-208ENST00000618534 ZNF507Q8TCN5 953 aa22.91■■□□□ 1.26
NEK3-208ENST00000618534 FAM84BQ96KN1 310 aaPredicted RBP22.91■■□□□ 1.26
NEK3-208ENST00000618534 DCP1AQ9NPI6 582 aaPredicted RBP22.91■■□□□ 1.26
NEK3-208ENST00000618534 PDS5AQ29RF7 1337 aaKnown RBP22.91■■□□□ 1.26
NEK3-208ENST00000618534 ATP1A1P05023 1023 aaKnown RBP22.91■■□□□ 1.26
NEK3-208ENST00000618534 CCDC148Q8NFR7 591 aa22.91■■□□□ 1.26
NEK3-208ENST00000618534 NSUN4Q96CB9 384 aaKnown RBP22.91■■□□□ 1.26
NEK3-208ENST00000618534 PODXL2Q9NZ53 605 aa22.91■■□□□ 1.26
NEK3-208ENST00000618534 FEZ2Q9UHY8 353 aaPredicted RBP22.91■■□□□ 1.26
NEK3-208ENST00000618534 A0A1W2PQC6 194 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 CALML3P27482 149 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 RASSF8Q8NHQ8 419 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 CAPN11Q9UMQ6 739 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 LAMB1P07942 1786 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 PHACTR2O75167 634 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 EEF1GP26641 437 aaKnown RBP22.9■■□□□ 1.26
NEK3-208ENST00000618534 MECOMQ03112 1051 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 CCDC122Q5T0U0 273 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 RCSD1Q6JBY9 416 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 TRIM47Q96LD4 638 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 PLIN2Q99541 437 aa22.9■■□□□ 1.26
NEK3-208ENST00000618534 CWC15Q9P013 229 aaKnown RBP22.9■■□□□ 1.26
NEK3-208ENST00000618534 RREB1Q92766 1687 aa22.89■■□□□ 1.26
NEK3-208ENST00000618534 TSPY2A6NKD2 308 aa22.89■■□□□ 1.26
NEK3-208ENST00000618534 KLRC4O43908 158 aa22.89■■□□□ 1.26
NEK3-208ENST00000618534 SRGAP2O75044 1071 aa22.89■■□□□ 1.26
NEK3-208ENST00000618534 FAM71BQ8TC56 605 aa22.89■■□□□ 1.26
NEK3-208ENST00000618534 MMS19Q96T76 1030 aa22.89■■□□□ 1.26
NEK3-208ENST00000618534 USP14P54578 494 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 SLC4A8Q2Y0W8 1093 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 HSP90B2PQ58FF3 399 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 TMEM60Q9H2L4 133 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 THAP9Q9H5L6 903 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 LCMT1Q9UIC8 334 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 PCDHA4Q9UN74 947 aa22.89■■□□□ 1.25
NEK3-208ENST00000618534 KLRK1P26718 216 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 ITPK1Q13572 414 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 KCNB1Q14721 858 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 TYW1BQ6NUM6 668 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 DTHD1Q6ZMT9 781 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 LEKR1Q6ZMV7 388 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 CRNKL1Q9BZJ0 848 aaKnown RBP22.88■■□□□ 1.25
NEK3-208ENST00000618534 MINPP1Q9UNW1 487 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 MYH14Q7Z406 1995 aaKnown RBP22.88■■□□□ 1.25
NEK3-208ENST00000618534 B4DLN1 442 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 KIF5BP33176 963 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 TSR1Q2NL82 804 aaKnown RBP22.88■■□□□ 1.25
NEK3-208ENST00000618534 ERFEQ4G0M1 354 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 SAR1BQ9Y6B6 198 aa22.88■■□□□ 1.25
NEK3-208ENST00000618534 PSMA7O14818 248 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 CAPZA3Q96KX2 299 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms