RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 PRR12Q9ULL5 1215 aa37.27■■■■□ 3.56
FMR1-216ENST00000616614 SLC38A10Q9HBR0 1119 aa37.27■■■■□ 3.56
FMR1-216ENST00000616614 TNPO2O14787 897 aaKnown RBP37.26■■■■□ 3.55
FMR1-216ENST00000616614 SNAP25P60880 206 aa37.26■■■■□ 3.55
FMR1-216ENST00000616614 PLS1Q14651 629 aa37.26■■■■□ 3.55
FMR1-216ENST00000616614 CPVLQ9H3G5 476 aa37.26■■■■□ 3.55
FMR1-216ENST00000616614 ARHGEF6Q15052 776 aa37.25■■■■□ 3.55
FMR1-216ENST00000616614 SRRDQ9UH36 339 aa37.25■■■■□ 3.55
FMR1-216ENST00000616614 GABRQQ9UN88 632 aa37.25■■■■□ 3.55
FMR1-216ENST00000616614 PTPN22Q9Y2R2 807 aa37.25■■■■□ 3.55
FMR1-216ENST00000616614 GNRH1P01148 92 aa37.24■■■■□ 3.55
FMR1-216ENST00000616614 TROAPQ12815 778 aa37.24■■■■□ 3.55
FMR1-216ENST00000616614 WDR19Q8NEZ3 1342 aa37.24■■■■□ 3.55
FMR1-216ENST00000616614 ZBED4O75132 1171 aa37.23■■■■□ 3.55
FMR1-216ENST00000616614 LIFRP42702 1097 aa37.23■■■■□ 3.55
FMR1-216ENST00000616614 CCNA1P78396 465 aa37.23■■■■□ 3.55
FMR1-216ENST00000616614 UBA5Q9GZZ9 404 aa37.23■■■■□ 3.55
FMR1-216ENST00000616614 HMGB1P09429 215 aaKnown RBP37.22■■■■□ 3.55
FMR1-216ENST00000616614 MAPK4P31152 587 aa37.22■■■■□ 3.55
FMR1-216ENST00000616614 PRKCZQ05513 592 aa37.22■■■■□ 3.55
FMR1-216ENST00000616614 GPATCH4Q5T3I0 446 aaKnown RBP37.22■■■■□ 3.55
FMR1-216ENST00000616614 SYDE2Q5VT97 1194 aa37.22■■■■□ 3.55
FMR1-216ENST00000616614 STAG2Q8N3U4 1231 aa37.22■■■■□ 3.55
FMR1-216ENST00000616614 RAVER2Q9HCJ3 691 aaKnown RBP37.22■■■■□ 3.55
FMR1-216ENST00000616614 GJD2Q9UKL4 321 aa37.22■■■■□ 3.55
FMR1-216ENST00000616614 HTTP42858 3142 aa37.22■■■■□ 3.55
FMR1-216ENST00000616614 ERCC3P19447 782 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 STAT3P40763 770 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 GPR142Q7Z601 462 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 CPXCR1Q8N123 301 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 MYL10Q9BUA6 226 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 MAD2L2Q9UI95 211 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 RIPK3Q9Y572 518 aa37.21■■■■□ 3.55
FMR1-216ENST00000616614 ATP2A1O14983 1001 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 PARP1P09874 1014 aaKnown RBP37.2■■■■□ 3.55
FMR1-216ENST00000616614 PKN2Q16513 984 aaKnown RBP37.2■■■■□ 3.55
FMR1-216ENST00000616614 ASPRV1Q53RT3 343 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 BLOC1S2Q6QNY1 142 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 RIOX2Q8IUF8 465 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 ZNF654Q8IZM8 581 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 PTCH2Q9Y6C5 1203 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 ZNF536O15090 1300 aa37.2■■■■□ 3.55
FMR1-216ENST00000616614 CASTP20810 708 aaKnown RBP37.19■■■■□ 3.54
FMR1-216ENST00000616614 RPS6KB1P23443 525 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 FBXO46Q6PJ61 603 aaPredicted RBP37.19■■■■□ 3.54
FMR1-216ENST00000616614 CATIPQ7Z7H3 387 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 TMTC2Q8N394 836 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 COA7Q96BR5 231 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 PALM3A6NDB9 673 aaPredicted RBP37.19■■■■□ 3.54
FMR1-216ENST00000616614 HOXD10P28358 340 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 FLT3LGP49771 235 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 GRM4Q14833 912 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 NFXL1Q6ZNB6 911 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 PLEKHH3Q7Z736 793 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 CCAR1Q8IX12 1150 aaKnown RBP37.19■■■■□ 3.54
FMR1-216ENST00000616614 SHCBP1Q8NEM2 672 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 ZSWIM6Q9HCJ5 1215 aa37.19■■■■□ 3.54
FMR1-216ENST00000616614 PSMA5P28066 241 aa37.18■■■■□ 3.54
FMR1-216ENST00000616614 WDR78Q5VTH9 848 aa37.18■■■■□ 3.54
FMR1-216ENST00000616614 SNRNP48Q6IEG0 339 aaKnown RBP37.18■■■■□ 3.54
FMR1-216ENST00000616614 SGMS1Q86VZ5 419 aa37.18■■■■□ 3.54
FMR1-216ENST00000616614 NCAPG2Q86XI2 1143 aa37.18■■■■□ 3.54
FMR1-216ENST00000616614 TEX13BQ9BXU2 312 aa37.18■■■■□ 3.54
FMR1-216ENST00000616614 RANBP17Q9H2T7 1088 aaKnown RBP37.18■■■■□ 3.54
FMR1-216ENST00000616614 MGAMO43451 1857 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 COL11A1P12107 1806 aaPredicted RBP37.17■■■■□ 3.54
FMR1-216ENST00000616614 CCDC69A6NI79 296 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 EIF5BO60841 1220 aaKnown RBP37.17■■■■□ 3.54
FMR1-216ENST00000616614 FDX1P10109 184 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 CCDC174Q6PII3 467 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 TNS4Q8IZW8 715 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 AGBL1Q96MI9 1066 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 BRPF3Q9ULD4 1205 aa37.17■■■■□ 3.54
FMR1-216ENST00000616614 CTDP1Q9Y5B0 961 aaPredicted RBP37.17■■■■□ 3.54
FMR1-216ENST00000616614 SLC35G1Q2M3R5 365 aa37.16■■■■□ 3.54
FMR1-216ENST00000616614 MORN1Q5T089 497 aa37.16■■■■□ 3.54
FMR1-216ENST00000616614 RAB11FIP4Q86YS3 637 aa37.16■■■■□ 3.54
FMR1-216ENST00000616614 NUP133Q8WUM0 1156 aa37.16■■■■□ 3.54
FMR1-216ENST00000616614 SLC25A27O95847 323 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 TAL1P17542 331 aaPredicted RBP37.15■■■■□ 3.54
FMR1-216ENST00000616614 OAZ1P54368 228 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 PRMT2P55345 433 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 Q6ZUG5 572 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 RUFY3Q7L099 469 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 TM6SF1Q9BZW5 370 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 MROH8Q9H579 483 aa37.15■■■■□ 3.54
FMR1-216ENST00000616614 KLRF2D3W0D1 207 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 DDAH1O94760 285 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 RXRAP19793 462 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 PTPREP23469 700 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 SLC4A3P48751 1232 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 ADGRF4Q8IZF3 695 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 USP6NLQ92738 828 aa37.14■■■■□ 3.54
FMR1-216ENST00000616614 NBPF11Q86T75 865 aa37.13■■■■□ 3.53
FMR1-216ENST00000616614 UPF3BQ9BZI7 483 aaKnown RBP37.13■■■■□ 3.53
FMR1-216ENST00000616614 SLC12A7Q9Y666 1083 aa37.13■■■■□ 3.53
FMR1-216ENST00000616614 MAP3K14Q99558 947 aa37.12■■■■□ 3.53
FMR1-216ENST00000616614 CWC22Q9HCG8 908 aaKnown RBP37.12■■■■□ 3.53
FMR1-216ENST00000616614 HPS5Q9UPZ3 1129 aa37.12■■■■□ 3.53
FMR1-216ENST00000616614 ANAPC15P60006 121 aa37.11■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms