RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 MYH15Q9Y2K3 1946 aa27.05■■□□□ 1.92
CCND3-223ENST00000616010 KIF23Q02241 960 aaPredicted RBP27.04■■□□□ 1.92
CCND3-223ENST00000616010 FAM173BQ6P4H8 233 aa27.04■■□□□ 1.92
CCND3-223ENST00000616010 KIF28PB7ZC32 967 aa27.04■■□□□ 1.92
CCND3-223ENST00000616010 STAT2P52630 851 aa27.04■■□□□ 1.92
CCND3-223ENST00000616010 LPAR1Q92633 364 aa27.04■■□□□ 1.92
CCND3-223ENST00000616010 USP14P54578 494 aa27.03■■□□□ 1.92
CCND3-223ENST00000616010 BACE1P56817 501 aa27.03■■□□□ 1.92
CCND3-223ENST00000616010 MAP3K11Q16584 847 aa27.03■■□□□ 1.92
CCND3-223ENST00000616010 ANKRD13AQ8IZ07 590 aa27.03■■□□□ 1.92
CCND3-223ENST00000616010 PHF20Q9BVI0 1012 aa27.03■■□□□ 1.92
CCND3-223ENST00000616010 TCHHQ07283 1943 aa27.03■■□□□ 1.92
CCND3-223ENST00000616010 GNL2Q13823 731 aaKnown RBP27.02■■□□□ 1.92
CCND3-223ENST00000616010 SAFBQ15424 915 aaKnown RBP eCLIP27.02■■□□□ 1.92
CCND3-223ENST00000616010 SYDE2Q5VT97 1194 aa27.02■■□□□ 1.92
CCND3-223ENST00000616010 ARMC9Q7Z3E5 817 aa27.02■■□□□ 1.92
CCND3-223ENST00000616010 BARHL2Q9NY43 387 aa27.02■■□□□ 1.92
CCND3-223ENST00000616010 DNM1Q05193 864 aaKnown RBP27.02■■□□□ 1.92
CCND3-223ENST00000616010 DIS3L2Q8IYB7 885 aaKnown RBP27.02■■□□□ 1.92
CCND3-223ENST00000616010 CLMNQ96JQ2 1002 aa27.02■■□□□ 1.92
CCND3-223ENST00000616010 ELP3Q9H9T3 547 aa27.02■■□□□ 1.92
CCND3-223ENST00000616010 STXBP3O00186 592 aa27.01■■□□□ 1.91
CCND3-223ENST00000616010 WDR46O15213 610 aaKnown RBP27.01■■□□□ 1.91
CCND3-223ENST00000616010 TYW1BQ6NUM6 668 aa27.01■■□□□ 1.91
CCND3-223ENST00000616010 BTNL9Q6UXG8 535 aa27.01■■□□□ 1.91
CCND3-223ENST00000616010 MTMR8Q96EF0 704 aa27.01■■□□□ 1.91
CCND3-223ENST00000616010 SH3GLB2Q9NR46 395 aa27.01■■□□□ 1.91
CCND3-223ENST00000616010 EMILIN3Q9NT22 766 aa27.01■■□□□ 1.91
CCND3-223ENST00000616010 ZBTB5O15062 677 aa27■■□□□ 1.91
CCND3-223ENST00000616010 MCM4P33991 863 aa27■■□□□ 1.91
CCND3-223ENST00000616010 AFG3L2Q9Y4W6 797 aa27■■□□□ 1.91
CCND3-223ENST00000616010 PNMA6FA0A0J9YX94 578 aa27■■□□□ 1.91
CCND3-223ENST00000616010 VCAM1P19320 739 aa27■■□□□ 1.91
CCND3-223ENST00000616010 NCLP19338 710 aaKnown RBP27■■□□□ 1.91
CCND3-223ENST00000616010 NLRP5P59047 1200 aa27■■□□□ 1.91
CCND3-223ENST00000616010 CDC37Q16543 378 aaPredicted RBP27■■□□□ 1.91
CCND3-223ENST00000616010 CCDC148Q8NFR7 591 aa27■■□□□ 1.91
CCND3-223ENST00000616010 CNKSR2Q8WXI2 1034 aa27■■□□□ 1.91
CCND3-223ENST00000616010 BTBD18B2RXH4 712 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 HMGCS2P54868 508 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 PRR12Q9ULL5 1215 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 NAPAP54920 295 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 BRAPQ7Z569 592 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 OXER1Q8TDS5 423 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 CNPY2Q9Y2B0 182 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 PTPRFP10586 1907 aa26.99■■□□□ 1.91
CCND3-223ENST00000616010 hCG_1984214I3L0E3 225 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 PPP1R11O60927 126 aaPredicted RBP26.98■■□□□ 1.91
CCND3-223ENST00000616010 U2AF2P26368 475 aaKnown RBP eCLIP26.98■■□□□ 1.91
CCND3-223ENST00000616010 KRT2P35908 639 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 QRICH1Q2TAL8 776 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 ZNF713Q8N859 430 aaPredicted RBP26.98■■□□□ 1.91
CCND3-223ENST00000616010 KIFC2Q96AC6 838 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 BRMS1Q9HCU9 246 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 FBXO28Q9NVF7 368 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 FEM1BQ9UK73 627 aa26.98■■□□□ 1.91
CCND3-223ENST00000616010 C19orf81C9J6K1 198 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 SNAP25P60880 206 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 NR5A1Q13285 461 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 NPY5RQ15761 445 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 SAMD1Q6SPF0 538 aaPredicted RBP26.97■■□□□ 1.91
CCND3-223ENST00000616010 CCDC12Q8WUD4 166 aaPredicted RBP26.97■■□□□ 1.91
CCND3-223ENST00000616010 CHURC1Q8WUH1 139 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 TANGO6Q9C0B7 1094 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 FOXP1Q9H334 677 aaPredicted RBP26.97■■□□□ 1.91
CCND3-223ENST00000616010 GOLGA6L22H0YM25 854 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 FAM160B2Q86V87 743 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 COA7Q96BR5 231 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 OTUD5Q96G74 571 aa26.97■■□□□ 1.91
CCND3-223ENST00000616010 PLA2G6O60733 806 aa26.96■■□□□ 1.91
CCND3-223ENST00000616010 ERO1BQ86YB8 467 aa26.96■■□□□ 1.91
CCND3-223ENST00000616010 NOSTRINQ8IVI9 506 aa26.96■■□□□ 1.91
CCND3-223ENST00000616010 C12orf42Q96LP6 360 aa26.96■■□□□ 1.91
CCND3-223ENST00000616010 RPAP3Q9H6T3 665 aaPredicted RBP26.96■■□□□ 1.91
CCND3-223ENST00000616010 GDPD2Q9HCC8 539 aa26.96■■□□□ 1.91
CCND3-223ENST00000616010 SPDYE5A6NIY4 337 aa26.95■■□□□ 1.91
CCND3-223ENST00000616010 CALML3P27482 149 aa26.95■■□□□ 1.91
CCND3-223ENST00000616010 KRT85P78386 507 aa26.95■■□□□ 1.91
CCND3-223ENST00000616010 CHADLQ6NUI6 762 aa26.95■■□□□ 1.91
CCND3-223ENST00000616010 DDX11L8A8MPP1 907 aa26.95■■□□□ 1.9
CCND3-223ENST00000616010 FIBPO43427 364 aa26.95■■□□□ 1.9
CCND3-223ENST00000616010 PPATQ06203 517 aa26.95■■□□□ 1.9
CCND3-223ENST00000616010 LDLRAD1Q5T700 205 aa26.95■■□□□ 1.9
CCND3-223ENST00000616010 RBM46Q8TBY0 533 aaKnown RBP26.95■■□□□ 1.9
CCND3-223ENST00000616010 TMOD4Q9NZQ9 345 aa26.95■■□□□ 1.9
CCND3-223ENST00000616010 CELF2O95319 508 aaKnown RBP26.94■■□□□ 1.9
CCND3-223ENST00000616010 MYSM1Q5VVJ2 828 aa26.94■■□□□ 1.9
CCND3-223ENST00000616010 FAM177A1Q8N128 213 aaPredicted RBP26.94■■□□□ 1.9
CCND3-223ENST00000616010 GBA2Q9HCG7 927 aaPredicted RBP26.94■■□□□ 1.9
CCND3-223ENST00000616010 PCDHA4Q9UN74 947 aa26.94■■□□□ 1.9
CCND3-223ENST00000616010 NBR1Q14596 966 aa26.94■■□□□ 1.9
CCND3-223ENST00000616010 SLF1Q9BQI6 1058 aa26.94■■□□□ 1.9
CCND3-223ENST00000616010 ZMYND12Q9H0C1 365 aa26.94■■□□□ 1.9
CCND3-223ENST00000616010 GPBP1L1Q9HC44 474 aaPredicted RBP26.94■■□□□ 1.9
CCND3-223ENST00000616010 PARP14Q460N5 1801 aa26.93■■□□□ 1.9
CCND3-223ENST00000616010 IRF6O14896 467 aa26.93■■□□□ 1.9
CCND3-223ENST00000616010 ADAMTS3O15072 1205 aa26.93■■□□□ 1.9
CCND3-223ENST00000616010 FLOT1O75955 427 aa26.93■■□□□ 1.9
CCND3-223ENST00000616010 TFIP11Q9UBB9 837 aaKnown RBP26.93■■□□□ 1.9
CCND3-223ENST00000616010 SMCO2A6NFE2 343 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms