RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 ZNF827Q17R98 1081 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 DZIP1Q86YF9 867 aaKnown RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CCDC12Q8WUD4 166 aaPredicted RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TFCP2L1Q9NZI6 479 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SERTAD1Q9UHV2 236 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 MAD2L2Q9UI95 211 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GYS1P13807 737 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CYP2C19P33261 490 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PRPHP41219 470 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GRIN1Q05586 938 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TTC38Q5R3I4 469 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FOXR1Q6PIV2 292 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 VPS54Q9P1Q0 977 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PCDHA4Q9UN74 947 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 BRWD3Q6RI45 1802 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 hCG_1984214I3L0E3 225 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SASH3O75995 380 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 HOXA7P31268 230 aaPredicted RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZNF713Q8N859 430 aaPredicted RBP12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PES1O00541 588 aaKnown RBP12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CUL4BQ13620 913 aa12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PAGE5Q96GU1 130 aa12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CD209Q9NNX6 404 aa12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 LRRC4BQ9NT99 713 aa12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 LRRC10BA6NIK2 292 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MYO1CO00159 1063 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CASQ1P31415 396 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GPSM2P81274 684 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 WDR24Q96S15 920 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 KAT14Q9H8E8 782 aa12.27□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 N4BP1O75113 896 aaKnown RBP12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FECHP22830 423 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NR1I3Q14994 352 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CDKAL1Q5VV42 579 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PDXDC2PQ6P474 469 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SP8Q8IXZ3 490 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CMTR1Q8N1G2 835 aaKnown RBP12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SH3RF3Q8TEJ3 882 aaPredicted RBP12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 A0A1B0GTH6 734 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GTF2A1P52655 376 aaPredicted RBP12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 KCNQ4P56696 695 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ETF1P62495 437 aaKnown RBP12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 LEKR1Q6ZMV7 388 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 APTXQ7Z2E3 356 aaKnown RBP12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 L2HGDHQ9H9P8 463 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MAGEF1Q9HAY2 307 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PDE11AQ9HCR9 933 aa12.26□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 A0A0G2JS52 829 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CYP2D6P10635 497 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RASA1P20936 1047 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PBX1P40424 430 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TFAP4Q01664 338 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SPATA1Q5VX52 437 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TMEM139Q8IV31 216 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MED15Q96RN5 788 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 BARHL2Q9NY43 387 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ITIH6Q6UXX5 1313 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 A0A087X0B3 334 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 STX17P56962 302 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RHBDL3P58872 404 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MRIQ9BWK5 157 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 POLD4Q9HCU8 107 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FANCLQ9NW38 375 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 COBLL1Q53SF7 1204 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 IQUBQ8NA54 791 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CUEDC2Q9H467 287 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FOXN1O15353 648 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PRDM1O75626 825 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PPP2R3AQ06190 1150 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MTF1Q14872 753 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 DNAJC21Q5F1R6 531 aaKnown RBP12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RPGRQ92834 1020 aaKnown RBP12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CCSER1Q9C0I3 900 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms