RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 ELP3Q9H9T3 547 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 PAG1Q9NWQ8 432 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 CD2APQ9Y5K6 639 aa10.08□□□□□ -0.8
CCL3-205ENST00000613928 CCDC171Q6TFL3 1326 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 MROH5Q6ZUA9 1318 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 UBR3Q6ZT12 1888 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 A6NHS1 94 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 GOLIM4O00461 696 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 DDIT3P35638 169 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 VEGFBP49765 207 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 CCDC158Q5M9N0 1113 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 NIF3L1Q9GZT8 377 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 SNX14Q9Y5W7 946 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 WDR90Q96KV7 1748 aa10.07□□□□□ -0.8
CCL3-205ENST00000613928 TAF5LO75529 589 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 RFC4P35249 363 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 IGHMBP2P38935 993 aaKnown RBP10.06□□□□□ -0.8
CCL3-205ENST00000613928 NECTIN1Q15223 517 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 EAPPQ56P03 285 aaPredicted RBP10.06□□□□□ -0.8
CCL3-205ENST00000613928 GORABQ5T7V8 394 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 ZNF589Q86UQ0 364 aaPredicted RBP10.06□□□□□ -0.8
CCL3-205ENST00000613928 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 FOXD4L4Q8WXT5 416 aaPredicted RBP10.06□□□□□ -0.8
CCL3-205ENST00000613928 MAP4K1Q92918 833 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 ZNF512BQ96KM6 892 aaPredicted RBP10.06□□□□□ -0.8
CCL3-205ENST00000613928 SETDB2Q96T68 719 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 SEC62Q99442 399 aaKnown RBP10.06□□□□□ -0.8
CCL3-205ENST00000613928 MPHOSPH8Q99549 860 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 HCN2Q9UL51 889 aa10.06□□□□□ -0.8
CCL3-205ENST00000613928 ARAP2Q8WZ64 1704 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 SNAP23O00161 211 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 P4HBP07237 508 aaKnown RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 NEK4P51957 841 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 FGD1P98174 961 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 NFIXQ14938 502 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 PUM3Q15397 648 aaKnown RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 CCDC129Q6ZRS4 1044 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 NBPF5PQ86XG9 351 aaPredicted RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 LPIN2Q92539 896 aa10.05□□□□□ -0.8
CCL3-205ENST00000613928 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 RBM8AQ9Y5S9 174 aaKnown RBP10.05□□□□□ -0.8
CCL3-205ENST00000613928 AKAP11Q9UKA4 1901 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 RNF113AO15541 343 aaKnown RBP10.04□□□□□ -0.8
CCL3-205ENST00000613928 SASH3O75995 380 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 RARAP10276 462 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 BMP4P12644 408 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 MX2P20592 715 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 MCAMP43121 646 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 MAPK8P45983 427 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 PHKA1P46020 1223 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 CHRNDQ07001 517 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 MCMDC2Q4G0Z9 681 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
CCL3-205ENST00000613928 CREB3L3Q68CJ9 461 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 TPTE2Q6XPS3 522 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 KRT25Q7Z3Z0 450 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 CELF1Q92879 486 aaKnown RBP10.04□□□□□ -0.8
CCL3-205ENST00000613928 CDC5LQ99459 802 aaKnown RBP10.04□□□□□ -0.8
CCL3-205ENST00000613928 SLC30A3Q99726 388 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 HELLSQ9NRZ9 838 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 CHMP5Q9NZZ3 219 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 TMEM63CQ9P1W3 806 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
CCL3-205ENST00000613928 NSFL1CQ9UNZ2 370 aaKnown RBP10.04□□□□□ -0.8
CCL3-205ENST00000613928 A0A1B0GUL6 1792 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 TNRC6CQ9HCJ0 1690 aaKnown RBP10.03□□□□□ -0.8
CCL3-205ENST00000613928 SLC27A2O14975 620 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 PHACTR2O75167 634 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 GYS1P13807 737 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 SLC5A1P13866 664 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 NFKB1P19838 968 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 TAF1P21675 1872 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 TM4SF1P30408 202 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 CTBSQ01459 385 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 GRIN2CQ14957 1233 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 ADCK5Q3MIX3 580 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 FLAD1Q8NFF5 587 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 BHMTQ93088 406 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 TTC14Q96N46 770 aa10.03□□□□□ -0.8
CCL3-205ENST00000613928 UPF3BQ9BZI7 483 aaKnown RBP10.03□□□□□ -0.8
CCL3-205ENST00000613928 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.8
CCL3-205ENST00000613928 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
CCL3-205ENST00000613928 M0R2C6 588 aa10.02□□□□□ -0.81
CCL3-205ENST00000613928 CPNE3O75131 537 aaKnown RBP10.02□□□□□ -0.81
CCL3-205ENST00000613928 MAP3K6O95382 1288 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms